RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 ZNF559Q9BR84 538 aa16.28■□□□□ 0.2
MCF2L-203ENST00000375604 FKBP14Q9NWM8 211 aa16.28■□□□□ 0.2
MCF2L-203ENST00000375604 FBXO45P0C2W1 286 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 AMY2BP19961 511 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 KDELR2P33947 212 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 CEACAM7Q14002 265 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 CCNJQ5T5M9 372 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 LIX1LQ8IVB5 337 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 OR5T1Q8NG75 326 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 TMEM121BQ9BXQ6 578 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-203ENST00000375604 NXF5Q9H1B4 397 aaKnown RBP16.27■□□□□ 0.2
MCF2L-203ENST00000375604 FAM118AQ9NWS6 357 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 DNMT3BQ9UBC3 853 aaKnown RBP16.27■□□□□ 0.2
MCF2L-203ENST00000375604 H3BNC9 293 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 DNAJB1P25685 340 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 CTSCP53634 463 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 GALNT1Q10472 559 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-203ENST00000375604 OR7A5Q15622 319 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 C3orf33Q6P1S2 294 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 CRB3Q9BUF7 120 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 EBF1Q9UH73 591 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 CDH10Q9Y6N8 788 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 CCRL2O00421 344 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 RAD51DO75771 328 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 RGS9O75916 674 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-203ENST00000375604 RBM34P42696 430 aaKnown RBP16.27■□□□□ 0.2
MCF2L-203ENST00000375604 RIDAP52758 137 aaKnown RBP16.27■□□□□ 0.2
MCF2L-203ENST00000375604 CDK3Q00526 305 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 LRIF1Q5T3J3 769 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 MS4A4AQ96JQ5 239 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 SCGB3A2Q96PL1 93 aa16.27■□□□□ 0.2
MCF2L-203ENST00000375604 LRRN3E7EW58 273 aa16.27■□□□□ 0.19
MCF2L-203ENST00000375604 ZNF12P17014 697 aa16.27■□□□□ 0.19
MCF2L-203ENST00000375604 CRISP1P54107 249 aa16.27■□□□□ 0.19
MCF2L-203ENST00000375604 PAGE3Q5JUK9 113 aa16.27■□□□□ 0.19
MCF2L-203ENST00000375604 AWAT2Q6E213 333 aa16.27■□□□□ 0.19
MCF2L-203ENST00000375604 ZNF584Q8IVC4 421 aa16.27■□□□□ 0.19
MCF2L-203ENST00000375604 HS3ST5Q8IZT8 346 aa16.27■□□□□ 0.19
MCF2L-203ENST00000375604 HINT2Q9BX68 163 aa16.27■□□□□ 0.19
MCF2L-203ENST00000375604 LRRN3Q9H3W5 708 aa16.27■□□□□ 0.19
MCF2L-203ENST00000375604 PPP6CO00743 305 aa16.27■□□□□ 0.19
MCF2L-203ENST00000375604 TIMP2P16035 220 aa16.27■□□□□ 0.19
MCF2L-203ENST00000375604 UBE2NP61088 152 aaKnown RBP16.27■□□□□ 0.19
MCF2L-203ENST00000375604 PIN1Q13526 163 aaPredicted RBP16.27■□□□□ 0.19
MCF2L-203ENST00000375604 GRM7Q14831 915 aa16.27■□□□□ 0.19
MCF2L-203ENST00000375604 PIANPQ8IYJ0 282 aa16.27■□□□□ 0.19
MCF2L-203ENST00000375604 METTL2AQ96IZ6 378 aaKnown RBP16.27■□□□□ 0.19
MCF2L-203ENST00000375604 CNN2Q99439 309 aaKnown RBP16.27■□□□□ 0.19
MCF2L-203ENST00000375604 OR10A4Q9H209 315 aa16.27■□□□□ 0.19
MCF2L-203ENST00000375604 KIAA0513O60268 411 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 NR2C1P13056 603 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 FOLR3P41439 243 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 TAS2R43P59537 309 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 ERVFC1P60507 584 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 EIF2B1Q14232 305 aaKnown RBP16.26■□□□□ 0.19
MCF2L-203ENST00000375604 FAM205BPQ63HN1 556 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 SDR9C7Q8NEX9 313 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 OR52R1Q8NGF1 315 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 AKAP1Q92667 903 aaKnown RBP eCLIP16.26■□□□□ 0.191e-6■■■■□ 23.1
MCF2L-203ENST00000375604 C7orf34Q96L11 122 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 NEDD4LQ96PU5 975 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 CLSTN3Q9BQT9 956 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 NUDT22Q9BRQ3 303 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 MLXQ9UH92 298 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 IRF2P14316 349 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 PCSK2P16519 638 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 FBXO27Q8NI29 283 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 RFT1Q96AA3 541 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 ICKQ9UPZ9 632 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 ERVK-19Q9WJR5 959 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 PRSS38A1L453 326 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 F5H5K5 113 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 G3V2L1 256 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 FANCGO15287 622 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 MT-ND2P03891 347 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 LYSMD4Q5XG99 296 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 PPP1R14BQ96C90 147 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 DNAJC25-GNG10A0A024R161 153 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 ZNF487B1APH4 448 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 DOK2O60496 412 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 RHCEP18577 417 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 RGRP47804 291 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 ZP2Q05996 745 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 MALLQ13021 153 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 TP53I3Q53FA7 332 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 GRHL2Q6ISB3 625 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 FAM71F1Q96KD3 344 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-203ENST00000375604 SLC2A11Q9BYW1 496 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 WDR6Q9NNW5 1121 aaKnown RBP16.26■□□□□ 0.19
MCF2L-203ENST00000375604 NDUFV2P19404 249 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 STT3AP46977 705 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 SFRP4Q6FHJ7 346 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-203ENST00000375604 DCDC5Q6ZRR9 648 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 UEVLDQ8IX04 471 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 ADAMTS19Q8TE59 1207 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 RHBDF1Q96CC6 855 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 FEVQ99581 238 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 ACTRT3Q9BYD9 372 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 SYNPO2LQ9H987 977 aa16.26■□□□□ 0.19
MCF2L-203ENST00000375604 TMEM184CQ9NVA4 438 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms