RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 ZNF542PQ5EBM4 170 aa16.04■□□□□ 0.16
RXRB-201ENST00000374680 ZNF761Q86XN6 746 aaPredicted RBP16.04■□□□□ 0.16
RXRB-201ENST00000374680 KIF18BQ86Y91 864 aa16.04■□□□□ 0.16
RXRB-201ENST00000374680 OR8J1Q8NGP2 316 aa16.04■□□□□ 0.16
RXRB-201ENST00000374680 ZFPM2Q8WW38 1151 aa16.04■□□□□ 0.16
RXRB-201ENST00000374680 PATE1Q8WXA2 126 aa16.04■□□□□ 0.16
RXRB-201ENST00000374680 OR7D2Q96RA2 312 aa16.04■□□□□ 0.16
RXRB-201ENST00000374680 BTBD1Q9H0C5 482 aa16.04■□□□□ 0.16
RXRB-201ENST00000374680 SLC25A19Q9HC21 320 aa16.04■□□□□ 0.16
RXRB-201ENST00000374680 MUTYHQ9UIF7 546 aa16.04■□□□□ 0.16
RXRB-201ENST00000374680 FAM170BA6NMN3 283 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 SNX4O95219 450 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 TP53P04637 393 aaPredicted RBP16.03■□□□□ 0.16
RXRB-201ENST00000374680 PSMA1P25786 263 aaKnown RBP16.03■□□□□ 0.16
RXRB-201ENST00000374680 CSTF2P33240 577 aaKnown RBP eCLIP16.03■□□□□ 0.16
RXRB-201ENST00000374680 PCYT1AP49585 367 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 RAB15P59190 212 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 SYT14P1Q58G82 188 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 KIAA1161Q6NSJ0 714 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 MTSS1LQ765P7 747 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 GDPD3Q7L5L3 318 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 MYADMQ96S97 322 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 SEMA4GQ9NTN9 838 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 MALT1Q9UDY8 824 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 SH3D21A4FU49 640 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 SLC35F4A4IF30 521 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 FAM183AA6NL82 134 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 SLC2A10O95528 541 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 MAN2A2P49641 1150 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 TGM3Q08188 693 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 KIAA1958Q8N8K9 716 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 ABCB9Q9NP78 766 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 ACSS1Q9NUB1 689 aaPredicted RBP16.03■□□□□ 0.16
RXRB-201ENST00000374680 RPL36Q9Y3U8 105 aaKnown RBP16.03■□□□□ 0.16
RXRB-201ENST00000374680 DNMT3AQ9Y6K1 912 aaPredicted RBP16.03■□□□□ 0.16
RXRB-201ENST00000374680 KIAA1549LQ6ZVL6 1849 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 DSPPQ9NZW4 1301 aa16.03■□□□□ 0.16
RXRB-201ENST00000374680 AP3D1O14617 1153 aa16.02■□□□□ 0.16
RXRB-201ENST00000374680 MPZL2O60487 215 aa16.02■□□□□ 0.16
RXRB-201ENST00000374680 ZNF888P0CJ79 500 aaPredicted RBP16.02■□□□□ 0.16
RXRB-201ENST00000374680 CSNK2A2P19784 350 aaPredicted RBP16.02■□□□□ 0.16
RXRB-201ENST00000374680 TRIM23P36406 574 aa16.02■□□□□ 0.16
RXRB-201ENST00000374680 VASPP50552 380 aaPredicted RBP16.02■□□□□ 0.16
RXRB-201ENST00000374680 UBE3AQ05086 875 aa16.02■□□□□ 0.16
RXRB-201ENST00000374680 GPR68Q15743 365 aa16.02■□□□□ 0.16
RXRB-201ENST00000374680 OR52I1Q8NGK6 324 aa16.02■□□□□ 0.16
RXRB-201ENST00000374680 OR8D4Q8NGM9 314 aa16.02■□□□□ 0.16
RXRB-201ENST00000374680 PBX4Q9BYU1 374 aa16.02■□□□□ 0.16
RXRB-201ENST00000374680 ENOPH1Q9UHY7 261 aa16.02■□□□□ 0.16
RXRB-201ENST00000374680 AP1M2Q9Y6Q5 423 aa16.02■□□□□ 0.16
RXRB-201ENST00000374680 CENPVL1A0A0U1RR11 272 aa16.02■□□□□ 0.15
RXRB-201ENST00000374680 PIP5K1CO60331 668 aa16.02■□□□□ 0.15
RXRB-201ENST00000374680 PVRP15151 417 aa16.02■□□□□ 0.15
RXRB-201ENST00000374680 ATP6V1E1P36543 226 aa16.02■□□□□ 0.15
RXRB-201ENST00000374680 NR4A2P43354 598 aa16.02■□□□□ 0.15
RXRB-201ENST00000374680 KHKP50053 298 aa16.02■□□□□ 0.15
RXRB-201ENST00000374680 PDX1P52945 283 aa16.02■□□□□ 0.15
RXRB-201ENST00000374680 FBXO46Q6PJ61 603 aaPredicted RBP16.02■□□□□ 0.15
RXRB-201ENST00000374680 SMARCD3Q6STE5 483 aa16.02■□□□□ 0.15
RXRB-201ENST00000374680 SLC30A8Q8IWU4 369 aa16.02■□□□□ 0.15
RXRB-201ENST00000374680 DTX3Q8N9I9 347 aa16.02■□□□□ 0.15
RXRB-201ENST00000374680 NLGN4YQ8NFZ3 816 aaPredicted RBP16.02■□□□□ 0.15
RXRB-201ENST00000374680 OR4F15Q8NGB8 312 aa16.02■□□□□ 0.15
RXRB-201ENST00000374680 NEDD4LQ96PU5 975 aa16.02■□□□□ 0.15
RXRB-201ENST00000374680 APOOQ9BUR5 198 aa16.02■□□□□ 0.15
RXRB-201ENST00000374680 SAP130Q9H0E3 1048 aa16.02■□□□□ 0.15
RXRB-201ENST00000374680 RSPH9Q9H1X1 276 aaPredicted RBP16.02■□□□□ 0.15
RXRB-201ENST00000374680 KLK4Q9Y5K2 254 aa16.02■□□□□ 0.15
RXRB-201ENST00000374680 GSAPA4D1B5 854 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 LGI1O95970 557 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 GNSP15586 552 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 SOX18P35713 384 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 HSD17B2P37059 387 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 ACTR1BP42025 376 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 SLC15A1P46059 708 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 ACTR1AP61163 376 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 SELENBP1Q13228 472 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 SRSF5Q13243 272 aaKnown RBP16.01■□□□□ 0.15
RXRB-201ENST00000374680 AGAP7PQ5VUJ5 663 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 ZC3H14Q6PJT7 736 aaKnown RBP16.01■□□□□ 0.15
RXRB-201ENST00000374680 FAM111BQ6SJ93 734 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 C9orf43Q8TAL5 461 aaPredicted RBP16.01■□□□□ 0.15
RXRB-201ENST00000374680 ZNF582Q96NG8 517 aaPredicted RBP16.01■□□□□ 0.15
RXRB-201ENST00000374680 TBX5Q99593 518 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 STARD5Q9NSY2 213 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 CNOT2Q9NZN8 540 aaKnown RBP16.01■□□□□ 0.15
RXRB-201ENST00000374680 CSNK1G3Q9Y6M4 447 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 RASGRP1O95267 797 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 TSPAN19P0C672 248 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 CCNYL3P0C7X3 344 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 GKN3PP0CG01 181 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 POLR2CP19387 275 aaPredicted RBP16.01■□□□□ 0.15
RXRB-201ENST00000374680 PKLRP30613 574 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 FLYWCH1Q4VC44 716 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 SLC35F1Q5T1Q4 408 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 MFSD4BQ5TF39 518 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 FAM92BQ6ZTR7 304 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 FLCNQ8NFG4 579 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 OR2L5Q8NG80 312 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 ADAMTS15Q8TE58 950 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms