RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 SOX3P41225 446 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 MAP3K8P41279 467 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 CDKN2CP42773 168 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 CYB561P49447 251 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 PRIM2P49643 509 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 PRKAG1P54619 331 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 NRG3P56975 720 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 KLF10Q13118 480 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 GAB1Q13480 694 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 TP53BP2Q13625 1128 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 UBAP2LQ14157 1087 aaKnown RBP13.87□□□□□ -0.19
HSPG2-201ENST00000374673 TLR1Q15399 786 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 ZNHIT3Q15649 155 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-201ENST00000374673 SPDYE7PQ495Y7 208 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 VPS26BQ4G0F5 336 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 CT45A2Q5DJT8 189 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 EXOSC6Q5RKV6 272 aaKnown RBP13.87□□□□□ -0.19
HSPG2-201ENST00000374673 ZNF468Q5VIY5 522 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-201ENST00000374673 MFSD12Q6NUT3 480 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 BHLHB9Q6PI77 547 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 OPN5Q6U736 354 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 NPSR1Q6W5P4 371 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 Q6ZS92 163 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 DND1Q8IYX4 353 aaKnown RBP13.87□□□□□ -0.19
HSPG2-201ENST00000374673 TRIML2Q8N7C3 387 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 CDRT4Q8N9R6 151 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 OR5AK3PQ8NH89 298 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 ASB15Q8WXK1 588 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 GTF2H4Q92759 462 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 CCT8L2Q96SF2 557 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 INPP5KQ9BT40 448 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 GPATCH2Q9NW75 528 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 VPS4AQ9UN37 437 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 A8MVJ9 347 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 OR6B1O95007 311 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 NKX2-2O95096 273 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 F10P00742 488 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 HMGN2P05204 90 aaKnown RBP13.86□□□□□ -0.19
HSPG2-201ENST00000374673 FBXO45P0C2W1 286 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 ZCCHC18P0CG32 403 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 TRPC1P48995 793 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 TNFSF10P50591 281 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 CORO7P57737 925 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 OC90Q02509 493 aaPredicted RBP13.86□□□□□ -0.19
HSPG2-201ENST00000374673 LASP1Q14847 261 aaKnown RBP13.86□□□□□ -0.19
HSPG2-201ENST00000374673 NNATQ16517 81 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 SAXO2Q658L1 398 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 SLC2A7Q6PXP3 512 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 MDS2Q8NDY4 140 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 SPACA9Q96E40 222 aaPredicted RBP13.86□□□□□ -0.19
HSPG2-201ENST00000374673 PHF12Q96QT6 1004 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 SLC35A5Q9BS91 424 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 EQTNQ9NQ60 294 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 HPF1Q9NWY4 346 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 GIN1Q9NXP7 522 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 ANKRD10Q9NXR5 420 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 LRFN1Q9P244 771 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 ARL2BPQ9Y2Y0 163 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 CSAG2Q9Y5P2 127 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 NPFFR2Q9Y5X5 522 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 CAPN7Q9Y6W3 813 aa13.86□□□□□ -0.19
HSPG2-201ENST00000374673 CAPN14A8MX76 684 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 NEURL1O76050 574 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 SNRPB2P08579 225 aaKnown RBP13.85□□□□□ -0.19
HSPG2-201ENST00000374673 KRT16P08779 473 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 ACP2P11117 423 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 NAGAP17050 411 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 ABCD3P28288 659 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 PTPN6P29350 595 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 TMED10P49755 219 aaKnown RBP13.85□□□□□ -0.19
HSPG2-201ENST00000374673 ST13P50502 369 aaKnown RBP13.85□□□□□ -0.19
HSPG2-201ENST00000374673 MAPRE2Q15555 327 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 OR1C1Q15619 314 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 NTRK2Q16620 822 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 ZNF791Q3KP31 576 aaPredicted RBP13.85□□□□□ -0.19
HSPG2-201ENST00000374673 C6orf10Q5SRN2 563 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 LRIF1Q5T3J3 769 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 CDC73Q6P1J9 531 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 ZNF621Q6ZSS3 439 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 C6orf120Q7Z4R8 191 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 ZNF227Q86WZ6 799 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 SLC44A2Q8IWA5 706 aaPredicted RBP13.85□□□□□ -0.19
HSPG2-201ENST00000374673 SLC34A3Q8N130 599 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 CYP4Z2PQ8N1L4 340 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 CLEC4FQ8N1N0 589 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 HORMAD2Q8N7B1 307 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 CATSPER1Q8NEC5 780 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 NEURL3Q96EH8 262 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 SLC35G5Q96KT7 338 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 SIGLEC12Q96PQ1 595 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 STACQ99469 402 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 ACTRT3Q9BYD9 372 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 PAIP1Q9H074 479 aaKnown RBP13.85□□□□□ -0.19
HSPG2-201ENST00000374673 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.85□□□□□ -0.19
HSPG2-201ENST00000374673 MYLK2Q9H1R3 596 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 Q9N2J8 555 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 LEF1Q9UJU2 399 aaPredicted RBP13.85□□□□□ -0.19
HSPG2-201ENST00000374673 NDUFAF1Q9Y375 327 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 PCDHGB6Q9Y5F9 930 aa13.85□□□□□ -0.19
HSPG2-201ENST00000374673 A0A096LPI6 279 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms