RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 SRPK3Q9UPE1 567 aa16.84■□□□□ 0.29
CD40-202ENST00000372285 MMACHCQ9Y4U1 282 aa16.84■□□□□ 0.29
CD40-202ENST00000372285 ADAMDEC1O15204 470 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 COQ9O75208 318 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 JRKO75564 520 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 DNAJB5O75953 348 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 IFNW1P05000 195 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 ALOX5P09917 674 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 MAOAP21397 527 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 ARHGDIAP52565 204 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 SERTAD2Q14140 314 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 SLC36A3Q495N2 470 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 TCEAL6Q6IPX3 200 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 UGT2A3Q6UWM9 527 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 OLIG3Q7RTU3 272 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 CARM1Q86X55 608 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 CHDHQ8NE62 594 aaPredicted RBP16.83■□□□□ 0.28
CD40-202ENST00000372285 RIT1Q92963 219 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 TCEAL3Q969E4 200 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 GFM1Q96RP9 751 aaKnown RBP16.83■□□□□ 0.28
CD40-202ENST00000372285 STACQ99469 402 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 ANKRD60Q9BZ19 345 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 SMURF2Q9HAU4 748 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 NECTIN3Q9NQS3 549 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 UBAP1Q9NZ09 502 aa16.83■□□□□ 0.28
CD40-202ENST00000372285 SAMHD1Q9Y3Z3 626 aaKnown RBP16.83■□□□□ 0.28
CD40-202ENST00000372285 MAGEA13PA6NCF6 341 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 A8MVJ9 347 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 NTN3O00634 580 aaPredicted RBP16.82■□□□□ 0.28
CD40-202ENST00000372285 GALR2O43603 387 aaPredicted RBP16.82■□□□□ 0.28
CD40-202ENST00000372285 SOX30O94993 753 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 SNAP29O95721 258 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 THRBP10828 461 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 FBLP22087 321 aaKnown RBP16.82■□□□□ 0.28
CD40-202ENST00000372285 RRM2P31350 389 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 GRK6P43250 576 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 CHRNEQ04844 493 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 DUSP8Q13202 625 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 SLITRK4Q8IW52 837 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 DHRSXQ8N5I4 330 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 CNBD2Q96M20 576 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 ZNF578Q96N58 590 aaPredicted RBP16.82■□□□□ 0.28
CD40-202ENST00000372285 SYNDIG1Q9H7V2 258 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 SIDT1Q9NXL6 827 aaKnown RBP16.82■□□□□ 0.28
CD40-202ENST00000372285 SATB2Q9UPW6 733 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 OR2W5A6NFC9 320 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 RHCEP18577 417 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 PRKACGP22612 351 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 ADARB1P78563 741 aaKnown RBP16.82■□□□□ 0.28
CD40-202ENST00000372285 RHBDD2Q6NTF9 364 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 QSOX2Q6ZRP7 698 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 ZNF605Q86T29 641 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 RCBTB1Q8NDN9 531 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 OR52R1Q8NGF1 315 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 BARD1Q99728 777 aaKnown RBP16.82■□□□□ 0.28
CD40-202ENST00000372285 PIP5K1AQ99755 562 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 YIPF2Q9BWQ6 316 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 PINK1Q9BXM7 581 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 LYVE1Q9Y5Y7 322 aa16.82■□□□□ 0.28
CD40-202ENST00000372285 H0YAE9 185 aa16.81■□□□□ 0.28
CD40-202ENST00000372285 ZIC2O95409 532 aaPredicted RBP16.81■□□□□ 0.28
CD40-202ENST00000372285 ALPPP05187 535 aa16.81■□□□□ 0.28
CD40-202ENST00000372285 LYNP07948 512 aa16.81■□□□□ 0.28
CD40-202ENST00000372285 UBTFL6P0CB48 400 aaPredicted RBP16.81■□□□□ 0.28
CD40-202ENST00000372285 CAPGP40121 348 aa16.81■□□□□ 0.28
CD40-202ENST00000372285 PDX1P52945 283 aa16.81■□□□□ 0.28
CD40-202ENST00000372285 GK3PQ14409 553 aa16.81■□□□□ 0.28
CD40-202ENST00000372285 MLIPQ5VWP3 458 aa16.81■□□□□ 0.28
CD40-202ENST00000372285 FRRS1Q6ZNA5 592 aa16.81■□□□□ 0.28
CD40-202ENST00000372285 C7orf57Q8NEG2 295 aa16.81■□□□□ 0.28
CD40-202ENST00000372285 OR6C1Q96RD1 312 aa16.81■□□□□ 0.28
CD40-202ENST00000372285 SDF2Q99470 211 aa16.81■□□□□ 0.28
CD40-202ENST00000372285 MTHFD2LQ9H903 347 aaPredicted RBP16.81■□□□□ 0.28
CD40-202ENST00000372285 TMEFF2Q9UIK5 374 aaPredicted RBP16.81■□□□□ 0.28
CD40-202ENST00000372285 FAM32AQ9Y421 112 aaKnown RBP16.81■□□□□ 0.28
CD40-202ENST00000372285 TESMINQ9Y4I5 508 aa16.81■□□□□ 0.28
CD40-202ENST00000372285 R4GN57 208 aa16.81■□□□□ 0.28
CD40-202ENST00000372285 VPS13AQ96RL7 3174 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 IGKV3D-11A0A0A0MRZ8 115 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 D6RAR5 112 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 TNFRSF11BO00300 401 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 NKX2-2O95096 273 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 LDOC1O95751 146 aaPredicted RBP16.8■□□□□ 0.28
CD40-202ENST00000372285 LGI1O95970 557 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 AK1P00568 194 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 ALBP02768 609 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 PABPC4LP0CB38 370 aaKnown RBP16.8■□□□□ 0.28
CD40-202ENST00000372285 MYF6P23409 242 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 EMDP50402 254 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 CHN2P52757 468 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 HMGA2P52926 109 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 HPCAP84074 193 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 FUT7Q11130 342 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 EPS8Q12929 822 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 RFX4Q33E94 735 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 AP1ARQ63HQ0 302 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 ANKRD34AQ69YU3 496 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 PRR23CQ6ZRP0 262 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 OR4C15Q8NGM1 316 aa16.8■□□□□ 0.28
CD40-202ENST00000372285 CYGBQ8WWM9 190 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms