RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 DNASE1P24855 282 aa21.05■□□□□ 0.96
TM9SF3-201ENST00000371142 SNTB2Q13425 540 aaKnown RBP21.05■□□□□ 0.96
TM9SF3-201ENST00000371142 ASRGL1Q7L266 308 aa21.05■□□□□ 0.96
TM9SF3-201ENST00000371142 ISCA2Q86U28 154 aa21.05■□□□□ 0.96
TM9SF3-201ENST00000371142 ABCG5Q9H222 651 aa21.05■□□□□ 0.96
TM9SF3-201ENST00000371142 PHLPP1O60346 1717 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 A0A1B0GV50 99 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 FAM171A2A8MVW0 826 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 SEMA4FO95754 770 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 SLC16A8O95907 504 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 ART1P52961 327 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 CTXN1P60606 82 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 RPS15P62841 145 aaKnown RBP21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 AWAT2Q6E213 333 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 TMEM40Q8WWA1 233 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 DIRAS3O95661 229 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 HOXA11P31270 313 aaPredicted RBP21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 MTNR1AP48039 350 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 NTRK2Q16620 822 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 PLXDC1Q8IUK5 500 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 BEST3Q8N1M1 668 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 PNPLA1Q8N8W4 532 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 KCMF1Q9P0J7 381 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 MAN2B1O00754 1011 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 RBM39Q14498 530 aaKnown RBP21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 OR5AR1Q8NGP9 310 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 SCRN2Q96FV2 425 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 MSANTD3Q96H12 275 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 ACTRT3Q9BYD9 372 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 RGCCQ9H4X1 137 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 UBE2J1Q9Y385 318 aaPredicted RBP21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 IL7P13232 177 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 MAMDC2Q7Z304 686 aaPredicted RBP21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 TRIM46Q7Z4K8 759 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 SLC5A8Q8N695 610 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 FIBINQ8TAL6 211 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 KLHL15Q96M94 604 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 LMF1Q96S06 567 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 FUNDC2Q9BWH2 189 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 RNF215Q9Y6U7 377 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 KCPQ6ZWJ8 1503 aa21.04■□□□□ 0.96
TM9SF3-201ENST00000371142 OTOL1A6NHN0 477 aaPredicted RBP21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 FBP2O00757 339 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 C7P10643 843 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 GTDC1Q4AE62 458 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 DNTTIP1Q9H147 329 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 MTG2Q9H4K7 406 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 CNR2P34972 360 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 HES5Q5TA89 166 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 TMEM173Q86WV6 379 aaPredicted RBP21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 OR51L1Q8NGJ5 315 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 ASB15Q8WXK1 588 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 ZNF175Q9Y473 711 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 PTGESO14684 152 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 IRF2P14316 349 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 HOXB9P17482 250 aaPredicted RBP21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 SLC2A5P22732 501 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 CERS1P27544 350 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 NAGSQ8N159 534 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 OR14L1PQ8NHC6 308 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 CD68P34810 354 aaPredicted RBP21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 CDKN2CP42773 168 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 GRIN2CQ14957 1233 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 SLC39A5Q6ZMH5 540 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 IL17RCQ8NAC3 791 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 TEPSINQ96N21 525 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 OR4K3Q96R72 315 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 ARL6Q9H0F7 186 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 SPO11Q9Y5K1 396 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 ZNF865P0CJ78 1059 aaPredicted RBP21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 C15orf39Q6ZRI6 1047 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 IGFN1Q86VF2 1251 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 ARL14Q8N4G2 192 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 TRMT10AQ8TBZ6 339 aaKnown RBP21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 SAMD8Q96LT4 415 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 DPCDQ9BVM2 203 aaPredicted RBP21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 ANKMY1Q9P2S6 941 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 C10orf71Q711Q0 1435 aa21.03■□□□□ 0.96
TM9SF3-201ENST00000371142 SNAPC5O75971 98 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 RAB3BP20337 219 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 HLCSP50747 726 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 WNT7BP56706 349 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 HNRNPKP61978 463 aaKnown RBP eCLIP21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 GRM7Q14831 915 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 FRS2Q8WU20 508 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 ARMC1Q9NVT9 282 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 THBS2P35442 1172 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 NCS1P62166 190 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 TMEM151BQ8IW70 566 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 OR4K5Q8NGD3 323 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 OR2T4Q8NH00 348 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 MTHFD2LQ9H903 347 aaPredicted RBP21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 SLC7A7Q9UM01 511 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 HIF3AQ9Y2N7 669 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 SOX3P41225 446 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 MFSD13AQ14CX5 517 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 TMEM205Q6UW68 189 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 FTMTQ8N4E7 242 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 CASP6P55212 293 aa21.02■□□□□ 0.96
TM9SF3-201ENST00000371142 GABARAPL2P60520 117 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms