RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 PCNX3Q9H6A9 2034 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 GOLGA6L10A0A0M3HER8 536 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 SLC22A20A6NK97 555 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 KLF4O43474 513 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 ZIC3O60481 467 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 NME6O75414 186 aaPredicted RBP13.88□□□□□ -0.19
SSR4-204ENST00000370087 CBX7O95931 251 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 CPMP14384 443 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 NAGAP17050 411 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 TCP1P17987 556 aaKnown RBP13.88□□□□□ -0.19
SSR4-204ENST00000370087 SRD5A2P31213 254 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 PIK3CGP48736 1102 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 XKP51811 444 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 NEK2P51955 445 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 ARFIP1P53367 373 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 ATP5J2P56134 94 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 ARL4CP56559 192 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 EEF1A1P68104 462 aaKnown RBP13.88□□□□□ -0.19
SSR4-204ENST00000370087 PDIA2Q13087 525 aaKnown RBP13.88□□□□□ -0.19
SSR4-204ENST00000370087 SNTA1Q13424 505 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 PRICKLE4Q2TBC4 344 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 EEF1A1P5Q5VTE0 462 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 HEPHL1Q6MZM0 1159 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 ZNF704Q6ZNC4 412 aaPredicted RBP13.88□□□□□ -0.19
SSR4-204ENST00000370087 ISCA2Q86U28 154 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 NUDT13Q86X67 352 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 PLCZ1Q86YW0 608 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 UBQLNLQ8IYU4 475 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 ZNF610Q8N9Z0 462 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 TMEM171Q8WVE6 324 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 TSPAN17Q96FV3 270 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 LCORQ96JN0 433 aaPredicted RBP13.88□□□□□ -0.19
SSR4-204ENST00000370087 NAPGQ99747 312 aaPredicted RBP13.88□□□□□ -0.19
SSR4-204ENST00000370087 CENPKQ9BS16 269 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 WDR41Q9HAD4 459 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 MAT2BQ9NZL9 334 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 PLLPQ9Y342 182 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 TSC22D4Q9Y3Q8 395 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 PRR14LQ5THK1 2151 aa13.88□□□□□ -0.19
SSR4-204ENST00000370087 E7ESA3 106 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 C16orf97H3BN30 126 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 CRHP06850 196 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 C8BP07358 591 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 MTHFD2P13995 350 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 STMN1P16949 149 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 PTX3P26022 381 aaPredicted RBP13.87□□□□□ -0.19
SSR4-204ENST00000370087 CUL3Q13618 768 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 LTB4RQ15722 352 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 AAGABQ6PD74 315 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 CMC1Q7Z7K0 106 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 ADCY4Q8NFM4 1077 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 OR4K14Q8NGD5 310 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 WDR20Q8TBZ3 569 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 ZNF845Q96IR2 970 aaPredicted RBP13.87□□□□□ -0.19
SSR4-204ENST00000370087 RBBP8Q99708 897 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 BRINP2Q9C0B6 783 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 NSMCE4AQ9NXX6 385 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 ELOVL5Q9NYP7 299 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 BCAP29Q9UHQ4 241 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 ZNF639Q9UID6 485 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 DKKL1Q9UK85 242 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 SNX12Q9UMY4 172 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 ABCA1O95477 2261 aa13.87□□□□□ -0.19
SSR4-204ENST00000370087 H0YIV9 168 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 KERAO60938 352 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 SEC31AO94979 1220 aaKnown RBP13.86□□□□□ -0.19
SSR4-204ENST00000370087 KCNJ5P48544 419 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 SUCLG1P53597 346 aaKnown RBP13.86□□□□□ -0.19
SSR4-204ENST00000370087 GAS1P54826 345 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 GPX6P59796 221 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 RAB10P61026 200 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 VEZF1Q14119 521 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 GUSBP1Q15486 140 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 CPSF6Q16630 551 aaKnown RBP eCLIP13.86□□□□□ -0.19
SSR4-204ENST00000370087 CLEC12BQ2HXU8 276 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 FAM219BQ5XKK7 198 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 FAM180BQ6P0A1 224 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 SCIMPQ6UWF3 145 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 OR52R1Q8NGF1 315 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 TMBIM1Q969X1 311 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 KLHL4Q9C0H6 718 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 ANKRA2Q9H9E1 313 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 CES1P1Q9UKY3 287 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 RNF11Q9Y3C5 154 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 PCDHGA11Q9Y5H2 935 aa13.86□□□□□ -0.19
SSR4-204ENST00000370087 FRG2CA6NGY1 282 aa13.85□□□□□ -0.19
SSR4-204ENST00000370087 ACOX3O15254 700 aa13.85□□□□□ -0.19
SSR4-204ENST00000370087 EMC8O43402 210 aa13.85□□□□□ -0.19
SSR4-204ENST00000370087 CD8BP10966 210 aa13.85□□□□□ -0.19
SSR4-204ENST00000370087 PORP16435 677 aaPredicted RBP13.85□□□□□ -0.19
SSR4-204ENST00000370087 SSTR1P30872 391 aa13.85□□□□□ -0.19
SSR4-204ENST00000370087 DEKP35659 375 aaKnown RBP13.85□□□□□ -0.19
SSR4-204ENST00000370087 FEN1P39748 380 aaKnown RBP13.85□□□□□ -0.19
SSR4-204ENST00000370087 EMDP50402 254 aa13.85□□□□□ -0.19
SSR4-204ENST00000370087 EXOC3L2Q2M3D2 409 aa13.85□□□□□ -0.19
SSR4-204ENST00000370087 TRMT12Q53H54 448 aaKnown RBP13.85□□□□□ -0.19
SSR4-204ENST00000370087 C6orf163Q5TEZ5 329 aa13.85□□□□□ -0.19
SSR4-204ENST00000370087 LIPJQ5W064 366 aa13.85□□□□□ -0.19
SSR4-204ENST00000370087 OR2A2Q6IF42 318 aa13.85□□□□□ -0.19
SSR4-204ENST00000370087 PODNL1Q6PEZ8 512 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms