RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ARG2P78540 354 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 TUBB3Q13509 450 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 ZNF791Q3KP31 576 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-207ENST00000368226 NADSYN1Q6IA69 706 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 PDZD3Q86UT5 571 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 CYB561A3Q8NBI2 242 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 OR7G3Q8NG95 312 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 SPRYD4Q8WW59 207 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-207ENST00000368226 PGAP3Q96FM1 320 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-207ENST00000368226 CPNE2Q96FN4 548 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-207ENST00000368226 ZNF559Q9BR84 538 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 MCOLN1Q9GZU1 580 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 RDH14Q9HBH5 336 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 GGT3PA6NGU5 568 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 CCRL2O00421 344 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 PSMA6P60900 246 aaKnown RBP12.23□□□□□ -0.45
PTPRK-207ENST00000368226 E2F1Q01094 437 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 CLCA4Q14CN2 919 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 STK11Q15831 433 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 GRK1Q15835 563 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 PAGE3Q5JUK9 113 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 TIGD4Q8IY51 512 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 GALNT6Q8NCL4 622 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 OR6Q1Q8NGQ2 317 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 L3HYPDHQ96EM0 354 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 FEVQ99581 238 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 MT-ND2P03891 347 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 XCR1P46094 333 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 UBE2NP61088 152 aaKnown RBP12.23□□□□□ -0.45
PTPRK-207ENST00000368226 MAT1AQ00266 395 aaKnown RBP12.23□□□□□ -0.45
PTPRK-207ENST00000368226 PIN1Q13526 163 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-207ENST00000368226 SLC25A25Q6KCM7 469 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 PLEKHG7Q6ZR37 379 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 HTR3DQ70Z44 454 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 ARHGAP12Q8IWW6 846 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 ELP5Q8TE02 316 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 DTD2Q96FN9 168 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 DCBLD2Q96PD2 775 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 DMRT3Q9NQL9 472 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 A0A0J9YY10 115 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 TFPTP0C1Z6 253 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 CTBSQ01459 385 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 ZMYND11Q15326 602 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 TCTE1Q5JU00 501 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 LIX1LQ8IVB5 337 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 PRR18Q8N4B5 295 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 KLHDC9Q8NEP7 349 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 FRS2Q8WU20 508 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 FCAMRQ8WWV6 532 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 CDS1Q92903 461 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 SAMD8Q96LT4 415 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 CCM2LQ9NUG4 571 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-207ENST00000368226 YARS2Q9Y2Z4 477 aaKnown RBP12.23□□□□□ -0.45
PTPRK-207ENST00000368226 TEX13CA0A0J9YWL9 993 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 GXYLT2A0PJZ3 443 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 CCR7P32248 378 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 ARF3P61204 181 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-207ENST00000368226 ARF1P84077 181 aaKnown RBP12.22□□□□□ -0.45
PTPRK-207ENST00000368226 CDK10Q15131 360 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 RGNQ15493 299 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 CDNFQ49AH0 187 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 CCNJQ5T5M9 372 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 MEDAGQ5VYS4 303 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 RFLNAQ6ZTI6 216 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 ALDH16A1Q8IZ83 802 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 ZBED3Q96IU2 234 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-207ENST00000368226 CNN2Q99439 309 aaKnown RBP12.22□□□□□ -0.45
PTPRK-207ENST00000368226 CUEDC1Q9NWM3 386 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-207ENST00000368226 REV1Q9UBZ9 1251 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 CITO14578 2027 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 ACOT7O00154 380 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 NPC1O15118 1278 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 NUAK1O60285 661 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 ZNF12P17014 697 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 CAPN3P20807 821 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 IVDP26440 423 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 GJA4P35212 333 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 CLCN2P51788 898 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 RIDAP52758 137 aaKnown RBP12.22□□□□□ -0.45
PTPRK-207ENST00000368226 NPRL3Q12980 569 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 TMEM69Q5SWH9 247 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 NKAIN2Q5VXU1 208 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 RAB12Q6IQ22 244 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 HLA-CQ95604 372 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 SCGB3A2Q96PL1 93 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 LRIT1Q9P2V4 623 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 VIRMAQ69YN4 1812 aaKnown RBP12.22□□□□□ -0.45
PTPRK-207ENST00000368226 RAD51DO75771 328 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 F10P00742 488 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 CD79AP11912 226 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 GGT1P19440 569 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 HOXD9P28356 352 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-207ENST00000368226 CD6P30203 668 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 SOX3P41225 446 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 MAGEA8P43361 318 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 XKRXQ6PP77 449 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 HS3ST5Q8IZT8 346 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 YTHDF1Q9BYJ9 559 aaKnown RBP12.22□□□□□ -0.45
PTPRK-207ENST00000368226 PELI2Q9HAT8 420 aa12.22□□□□□ -0.45
PTPRK-207ENST00000368226 TREM1Q9NP99 234 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms