RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TLCD1Q96CP7 247 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 TUBGCP3Q96CW5 907 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 ELP4Q96EB1 424 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 AMDHD1Q96NU7 426 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 TSSK3Q96PN8 268 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 ITPAQ9BY32 194 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 ANGPTL4Q9BY76 406 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 TTTY12Q9BZ98 90 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 DEFB127Q9H1M4 99 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 ANKRA2Q9H9E1 313 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 PROK2Q9HC23 129 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 TUBA8Q9NY65 449 aaPredicted RBP9.06□□□□□ -0.96
CD48-202ENST00000368046 SH3BP4Q9P0V3 963 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 CNOT11Q9UKZ1 510 aaKnown RBP9.06□□□□□ -0.96
CD48-202ENST00000368046 C19orf53Q9UNZ5 99 aaPredicted RBP9.06□□□□□ -0.96
CD48-202ENST00000368046 RP1L1Q8IWN7 2480 aaPredicted RBP9.05□□□□□ -0.96
CD48-202ENST00000368046 A0A1B0GTH9 108 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 FRG2CA6NGY1 282 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 UPK1AO00322 258 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 CCL21O00585 134 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 PRRG2O14669 202 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 AKAP10O43572 662 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 SKAP2O75563 359 aaPredicted RBP9.05□□□□□ -0.96
CD48-202ENST00000368046 PDE9AO76083 593 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 LRATO95237 230 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 IFI6P09912 130 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 CT45A8P0DMV1 189 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 CT45A9P0DMV2 189 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 ABOP16442 354 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 DDX5P17844 614 aaKnown RBP9.05□□□□□ -0.96
CD48-202ENST00000368046 NTSP30990 170 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 PTGS2P35354 604 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 RPL3P39023 403 aaKnown RBP9.05□□□□□ -0.96
CD48-202ENST00000368046 FRKP42685 505 aaPredicted RBP9.05□□□□□ -0.96
CD48-202ENST00000368046 CA7P43166 264 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 MANFP55145 182 aaKnown RBP9.05□□□□□ -0.96
CD48-202ENST00000368046 WDR4P57081 412 aaKnown RBP9.05□□□□□ -0.96
CD48-202ENST00000368046 FBXW4P57775 412 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 KCNJ2P63252 427 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 HSF1Q00613 529 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 EMX2Q04743 252 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 MAD2L1Q13257 205 aaPredicted RBP9.05□□□□□ -0.96
CD48-202ENST00000368046 PDE7AQ13946 482 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 RPS6KA2Q15349 733 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 CT45A2Q5DJT8 189 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 AGBL2Q5U5Z8 902 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 PRAMEF20Q5VT98 475 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 IL23RQ5VWK5 629 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 C1QL3Q5VWW1 255 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 ARHGAP11AQ6P4F7 1023 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 TMEM81Q6P7N7 255 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 FJX1Q86VR8 437 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 CHERPQ8IWX8 916 aaKnown RBP9.05□□□□□ -0.96
CD48-202ENST00000368046 PRR22Q8IZ63 422 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 TMEM251Q8N6I4 163 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 NATD1Q8N6N6 113 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 FNDC5Q8NAU1 212 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 MAGED4Q96JG8 741 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 VSTM2LQ96N03 204 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 SORT1Q99523 831 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 DOHHQ9BU89 302 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 ZDHHC11Q9H8X9 412 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 ZFP64Q9NPA5 681 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 ACSS1Q9NUB1 689 aaPredicted RBP9.05□□□□□ -0.96
CD48-202ENST00000368046 NKIRAS1Q9NYS0 192 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 ATP6V1HQ9UI12 483 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 HAO1Q9UJM8 370 aa9.05□□□□□ -0.96
CD48-202ENST00000368046 EIF3LQ9Y262 564 aaKnown RBP9.05□□□□□ -0.96
CD48-202ENST00000368046 A0A0G2JMM0 328 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 A0A1B0GVC2 190 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 A0A1W2PPB8 328 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 A0A1W2PRS3 328 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 FAM166BA8MTA8 275 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 KIR3DP1A8MWS1 328 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 PDPK1O15530 556 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 SUSD5O60279 629 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 CDC40O60508 579 aaKnown RBP eCLIP9.04□□□□□ -0.96
CD48-202ENST00000368046 COQ9O75208 318 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 TRIM3O75382 744 aaPredicted RBP9.04□□□□□ -0.96
CD48-202ENST00000368046 ERN1O75460 977 aaKnown RBP9.04□□□□□ -0.96
CD48-202ENST00000368046 REM1O75628 298 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 IGHG3P01860 377 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 ESRRAP11474 423 aaPredicted RBP9.04□□□□□ -0.96
CD48-202ENST00000368046 PRPS1L1P21108 318 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 MAGEA5P43359 124 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 PNLIPRP2P54317 469 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 BST1Q10588 318 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 SNTA1Q13424 505 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 MLC1Q15049 377 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 C3AR1Q16581 482 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 CYP27C1Q4G0S4 372 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 ZNF385BQ569K4 471 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 ATG16L1Q676U5 607 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 ANKRD26P1Q6NSI1 321 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 MTFR2Q6P444 385 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 TMEM107Q6UX40 140 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 ZNF551Q7Z340 670 aaPredicted RBP9.04□□□□□ -0.96
CD48-202ENST00000368046 DOLPP1Q86YN1 238 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 TRIM42Q8IWZ5 723 aa9.04□□□□□ -0.96
CD48-202ENST00000368046 SLC34A3Q8N130 599 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms