RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 EFNA2O43921 213 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 SRP72O76094 671 aaKnown RBP-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 AKR7A3O95154 331 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 ANP32DO95626 131 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 IGHV3-48P01763 117 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 RB1P06400 928 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF688P0C7X2 276 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 LINC00869P0C866 280 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 STAG3L1P0CL83 205 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 UBL4AP11441 157 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 CBR1P16152 277 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 PGAM1P18669 254 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 ABCD3P28288 659 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 HPDP32754 393 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 G6PCP35575 357 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 NEK3P51956 506 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 NTHL1P78549 312 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 SULT2A1Q06520 285 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 FMODQ06828 376 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 PUDPQ08623 228 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 KCTD2Q14681 263 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 CRYMQ14894 314 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 BRD3Q15059 726 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 PARP10Q53GL7 1025 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF542PQ5EBM4 170 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 N4BP2L1Q5TBK1 243 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 WDR78Q5VTH9 848 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 C1orf189Q5VU69 101 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 NAA16Q6N069 864 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 ALKBH5Q6P6C2 394 aaKnown RBP-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 TEX38Q6PEX7 206 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 CXCL17Q6UXB2 119 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 ACP7Q6ZNF0 438 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 PIGWQ7Z7B1 504 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 SNX32Q86XE0 403 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 MEX3DQ86XN8 651 aaKnown RBP-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 CCDC146Q8IYE0 955 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 PGAM4Q8N0Y7 254 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 TMEM252Q8N6L7 170 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 LRRC52Q8N7C0 313 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 SPATA5Q8NB90 893 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 POGLUT1Q8NBL1 392 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF740Q8NDX6 193 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 MCUQ8NE86 351 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 GPR148Q8TDV2 347 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 FAM151AQ8WW52 585 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 ATP6V0A1Q93050 837 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 LRRC59Q96AG4 307 aaKnown RBP-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 RAB3CQ96E17 227 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 SPACA9Q96E40 222 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF274Q96GC6 653 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 TAAR1Q96RJ0 339 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 PKMYT1Q99640 499 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 PLGRKTQ9HBL7 147 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 DMAP1Q9NPF5 467 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 EXOSC3Q9NQT5 275 aaKnown RBP-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 PHPT1Q9NRX4 125 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 ARHGEF38Q9NXL2 777 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 DCDC2Q9UHG0 476 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF215Q9UL58 517 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 FOXA2Q9Y261 457 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 WDR45Q9Y484 360 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 ETV7Q9Y603 341 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 RPS6KL1Q9Y6S9 549 aa-0.46□□□□□ -2.48
RNU6-54P-201ENST00000365563 COL6A6A6NMZ7 2263 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 SCN2AQ99250 2005 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 CCDC88CQ9P219 2028 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 IGKV1D-37A0A075B6S9 117 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 TRAV18A0A075B6X5 111 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 SMIM28A0A1B0GU29 152 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 A0A1W2PP18 115 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF732B4DXR9 585 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 CCDC188H7C350 402 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 P2RX6O15547 441 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 MLNRO43193 412 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 KIAA0513O60268 411 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 TMEM63AO94886 807 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 RTN3O95197 1032 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 GSRP00390 522 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 CSN3P07498 182 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 IFIT2P09913 472 aaKnown RBP-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 TCP1P17987 556 aaKnown RBP-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 GABRB1P18505 474 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 EEF1B2P24534 225 aaKnown RBP-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 CHKAP35790 457 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 HSD17B3P37058 310 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 PPARGP37231 505 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 NMUP48645 174 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 UBE2AP49459 152 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 METAP1P53582 386 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 GALK2Q01415 458 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 IL10RBQ08334 325 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF616Q08AN1 781 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 TRIM14Q14142 442 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZIC1Q15915 447 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 CFAP221Q4G0U5 840 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 DEFB134Q4QY38 66 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 TMEM255AQ5JRV8 349 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 DDI2Q5TDH0 399 aa-0.47□□□□□ -2.48
RNU6-54P-201ENST00000365563 LGSNQ5TDP6 509 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms