RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 HELZ2Q9BYK8 2649 aaKnown RBP4.9□□□□□ -1.62
RNU4-39P-201ENST00000362455 CELSR3Q9NYQ7 3312 aa4.9□□□□□ -1.62
RNU4-39P-201ENST00000362455 A0A087WUV0 522 aaPredicted RBP4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 TRBV4-1A0A0J9YWV2 114 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 MAGEB16A2A368 324 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 BCLAF3A2AJT9 711 aaKnown RBP4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 MSGN1A6NI15 193 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 E9PMD0 336 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 SLC16A4O15374 487 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 KIF5CO60282 957 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 LETM1O95202 739 aaPredicted RBP4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 EML2O95834 649 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 RAF1P04049 648 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 CXCL8P10145 99 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 MCF2P10911 925 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 SLC2A2P11168 524 aaPredicted RBP4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 KRT3P12035 628 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 BCKDHBP21953 392 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 NMT1P30419 496 aaKnown RBP4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 TNFSF9P41273 254 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 NOVA1P51513 510 aaKnown RBP4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 SMSP52788 366 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 IRX4P78413 519 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 FAM53AQ6NSI3 398 aaPredicted RBP4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 SLC25A47Q6Q0C1 308 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 DHRS11Q6UWP2 260 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 LEKR1Q6ZMV7 388 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 C1orf186Q6ZWK4 172 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 BTN2A1Q7KYR7 527 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 CENPQQ7L2Z9 268 aaPredicted RBP4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 FCRLAQ7L513 359 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 NR2C2APQ86WQ0 139 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 TMEM126BQ8IUX1 230 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 RTL3Q8N8U3 475 aaKnown RBP4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 TMEM178AQ8NBL3 297 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 LEMD2Q8NC56 503 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 TMEM161BQ8NDZ6 487 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 TRIM58Q8NG06 486 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 KIFAP3Q92845 792 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 NXPE2Q96DL1 559 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 MSANTD3Q96H12 275 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 NEDD4LQ96PU5 975 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 EDEM2Q9BV94 578 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 CCDC94Q9BW85 323 aaPredicted RBP4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 DPEP2Q9H4A9 486 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 EXOC1Q9NV70 894 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 PANK4Q9NVE7 773 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 FBXL4Q9UKA2 621 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZNF510Q9Y2H8 683 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 TMED7Q9Y3B3 224 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 LOC400499M0QZD8 3231 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 CACNA1EQ15878 2313 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 DOCK7Q96N67 2140 aa4.9□□□□□ -1.63
RNU4-39P-201ENST00000362455 PATJQ8NI35 1801 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 EME2A4GXA9 379 aaPredicted RBP4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 CCDC169A6NNP5 214 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 PIRO00625 290 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 PCDH7O60245 1069 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 TOM1L1O75674 476 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 AP2A2O94973 939 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 REC8O95072 547 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 PAK4O96013 591 aaPredicted RBP4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 TYMPP19971 482 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 MARCKSP29966 332 aaPredicted RBP4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 CCT6AP40227 531 aaKnown RBP4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 NR0B1P51843 470 aaKnown RBP4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 OR1D5P58170 312 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 SGCGQ13326 291 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 RUNX3Q13761 415 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 PPA1Q15181 289 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 FFAR4Q5NUL3 377 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 SDHAF4Q5VUM1 108 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 RAB12Q6IQ22 244 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 SLC39A4Q6P5W5 647 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 C18orf65Q6ZTR6 163 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 APLFQ8IW19 511 aaPredicted RBP4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 LAX1Q8IWV1 398 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZC3H3Q8IXZ2 948 aaKnown RBP4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 CMTM8Q8IZV2 173 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 ELMOD1Q8N336 334 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 DEFB124Q8NES8 71 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 IFT74Q96LB3 600 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 SENP8Q96LD8 212 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 CYP2S1Q96SQ9 504 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 PITPNM3Q9BZ71 974 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 LINC00597Q9H2U6 94 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 MAGEF1Q9HAY2 307 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 MAN2C1Q9NTJ4 1040 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 DDX19AQ9NUU7 478 aaKnown RBP4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZNF580Q9UK33 172 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 KLK13Q9UKR3 277 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 ELF5Q9UKW6 265 aaPredicted RBP4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 ASB3Q9Y575 518 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 TEX264Q9Y6I9 313 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 CFAP46Q8IYW2 2715 aa4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 ASH1LQ9NR48 2969 aaKnown RBP4.89□□□□□ -1.63
RNU4-39P-201ENST00000362455 VWA8A3KMH1 1905 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 IGHV4-4A0A075B6R2 117 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms