RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 SERPINA12Q8IW75 414 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 PRSS58Q8IYP2 241 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 OR8S1Q8NH09 359 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 HMGB4Q8WW32 186 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 SNX18Q96RF0 628 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 DPH7Q9BTV6 452 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 LRRN3Q9H3W5 708 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 SRMSQ9H3Y6 488 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 DDX31Q9H8H2 851 aaKnown RBP13.17□□□□□ -0.3
COL6A1-201ENST00000361866 SLC35C2Q9NQQ7 365 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 BLOC1S5-TXNDC5H3BN57 136 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 UPK1AO00322 258 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 SSX4O60224 188 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 ASGR2P07307 311 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 HTR1AP08908 422 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 PRR35P0CG20 571 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 SEC13P55735 322 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 PON3Q15166 354 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 GET4Q7L5D6 327 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-201ENST00000361866 LACC1Q8IV20 430 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 FANK1Q8TC84 345 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 OVCA2Q8WZ82 227 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 TANKQ92844 425 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 ZSWIM3Q96MP5 696 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 TMEM175Q9BSA9 504 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 KLF16Q9BXK1 252 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-201ENST00000361866 RBCK1Q9BYM8 510 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 CERS4Q9HA82 394 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 GALNT9Q9HCQ5 603 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 CREBZFQ9NS37 354 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 NLGN3Q9NZ94 848 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 MED11Q9P086 117 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 ALG5Q9Y673 324 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 SHANK3Q9BYB0 1731 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 SOX30O94993 753 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 GYPBP06028 91 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 H2AFB2P0C5Z0 115 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 JUNDP17535 347 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 NDUFV2P19404 249 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 UGT2B10P36537 528 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 C2orf27AQ580R0 203 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 KHDRBS2Q5VWX1 349 aaKnown RBP13.16□□□□□ -0.3
COL6A1-201ENST00000361866 FIGNL1Q6PIW4 674 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 GRASPQ7Z6J2 395 aaPredicted RBP13.16□□□□□ -0.3
COL6A1-201ENST00000361866 SLC44A3Q8N4M1 653 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 HDDC3Q8N4P3 179 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 FIBINQ8TAL6 211 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 TREX2Q9BQ50 279 aaPredicted RBP13.16□□□□□ -0.3
COL6A1-201ENST00000361866 FOLH1BQ9HBA9 442 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 MUTYHQ9UIF7 546 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 H7C0S8 307 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 PRODHO43272 600 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 B4GALT3O60512 393 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 SLC25A12O75746 678 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 APOC3P02656 99 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 CHRNB1P11230 501 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 PSMB5P28074 263 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 HLA-FP30511 346 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 ADH7P40394 386 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 DEFB134Q4QY38 66 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 OR56A1Q8NGH5 318 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 C1QTNF3Q9BXJ4 246 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 FER1L6Q2WGJ9 1857 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 ELOA3DA6NLF2 546 aaPredicted RBP13.16□□□□□ -0.3
COL6A1-201ENST00000361866 CSO75390 466 aaKnown RBP13.16□□□□□ -0.3
COL6A1-201ENST00000361866 IMPA1P29218 277 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 EVI2BP34910 448 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 MAGEA2P43356 314 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 ELOA3BQ3SY89 546 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.16□□□□□ -0.3
COL6A1-201ENST00000361866 MMP21Q8N119 569 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 NATD1Q8N6N6 113 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 ELOA3Q8NG57 546 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 OR7G1Q8NGA0 311 aa13.16□□□□□ -0.3
COL6A1-201ENST00000361866 GRXCR1A8MXD5 290 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 SLC19A2O60779 497 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 PRSS23O95084 383 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 SERPINA3P01011 423 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 IHHQ14623 411 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 CDK10Q15131 360 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 HYAL4Q2M3T9 481 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 SCGB2B2Q4G0G5 96 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 UBE2Q1Q7Z7E8 422 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 RASGEF1AQ8N9B8 481 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 L3MBTL4Q8NA19 623 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 THAP7Q9BT49 309 aaPredicted RBP13.15□□□□□ -0.3
COL6A1-201ENST00000361866 DPH1Q9BZG8 443 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 KATNBL1Q9H079 304 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 ARL6Q9H0F7 186 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 RANBP3Q9H6Z4 567 aaPredicted RBP13.15□□□□□ -0.3
COL6A1-201ENST00000361866 BRF2Q9HAW0 419 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 SPHK2Q9NRA0 654 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 MGAT4CQ9UBM8 478 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 RASD1Q9Y272 281 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 PCDHGB2Q9Y5G2 931 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 CDH10Q9Y6N8 788 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 TEX46H3BTG2 121 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 IFNA6P05013 189 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 CR2P20023 1033 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 GIFP27352 417 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms