RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 BOLLQ8N9W6 283 aaKnown RBP17.6■□□□□ 0.41
CLIP2-202ENST00000361545 OR4K5Q8NGD3 323 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 S100A16Q96FQ6 103 aaKnown RBP17.6■□□□□ 0.41
CLIP2-202ENST00000361545 SFXN2Q96NB2 322 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 FEVQ99581 238 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 TRPV4Q9HBA0 871 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 ACAD8Q9UKU7 415 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 EGFP01133 1207 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 RPS17P08708 135 aaKnown RBP17.6■□□□□ 0.41
CLIP2-202ENST00000361545 WDR53Q7Z5U6 358 aaPredicted RBP17.6■□□□□ 0.41
CLIP2-202ENST00000361545 ZER1Q7Z7L7 766 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 CLEC1AQ8NC01 280 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 PROKR1Q8TCW9 393 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 ATOH1Q92858 354 aaPredicted RBP17.6■□□□□ 0.41
CLIP2-202ENST00000361545 BMFQ96LC9 184 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 MYRFLQ96LU7 910 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 PCDHB16Q9NRJ7 776 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 RXFP3Q9NSD7 469 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 GLI3P10071 1580 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 SCGB1D2O95969 90 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 ACVR1BP36896 505 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 SEC23BQ15437 767 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 C6orf89Q6UWU4 347 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 ZNF675Q8TD23 568 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 NETO1Q8TDF5 533 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 PPP1R14BQ96C90 147 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 ACPTQ9BZG2 426 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 HHATLQ9HCP6 504 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 FRS3O43559 492 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 MAP2K4P45985 399 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 AKR1D1P51857 326 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 CDKL1Q00532 357 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 PAGE3Q5JUK9 113 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 OR8J1Q8NGP2 316 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 EDAQ92838 391 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 MYH9P35579 1960 aaKnown RBP17.59■□□□□ 0.41
CLIP2-202ENST00000361545 SH3PXD2BA1X283 911 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 TRAPPC13A5PLN9 417 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 HOXD8P13378 290 aaPredicted RBP17.59■□□□□ 0.41
CLIP2-202ENST00000361545 ZNF43P17038 809 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 LEG1Q6P5S2 330 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 GPR149Q86SP6 731 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 CCDC107Q8WV48 283 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 PCDHGA3Q9Y5H0 932 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 J3QRK9 145 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 L7N2F9 121 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 AREL1O15033 823 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 ARHGEF15O94989 841 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 ZNF28P17035 718 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 GLP1RP43220 463 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 OR1D4P47884 311 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 UBE2NP61088 152 aaKnown RBP17.59■□□□□ 0.41
CLIP2-202ENST00000361545 VAMP2P63027 116 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 NPRL3Q12980 569 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 ARHGAP11AQ6P4F7 1023 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 SLC5A8Q8N695 610 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 OR9A4Q8NGU2 314 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 ASB11Q8WXH4 323 aa17.59■□□□□ 0.41
CLIP2-202ENST00000361545 CTXN1P60606 82 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 GLT8D1Q68CQ7 371 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 MSANTD1Q6ZTZ1 278 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 ZNF765Q7L2R6 523 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 TANKQ92844 425 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 NINJ1Q92982 152 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 FRMD6Q96NE9 622 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 RDH12Q96NR8 316 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 CITED4Q96RK1 184 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 WACQ9BTA9 647 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 SLC22A4Q9H015 551 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 TTYH1Q9H313 450 aaPredicted RBP17.58■□□□□ 0.41
CLIP2-202ENST00000361545 SLC7A11Q9UPY5 501 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 DHDHQ9UQ10 334 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 TEX13DA0A0J9YY54 714 aaPredicted RBP17.58■□□□□ 0.41
CLIP2-202ENST00000361545 RASAL1O95294 804 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 HMGN2P05204 90 aaKnown RBP17.58■□□□□ 0.41
CLIP2-202ENST00000361545 FESP07332 822 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 FGF4P08620 206 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 ADAM15Q13444 863 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 EXOSC7Q15024 291 aaKnown RBP17.58■□□□□ 0.41
CLIP2-202ENST00000361545 HACD2Q6Y1H2 254 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 TMEM14AQ9Y6G1 99 aa17.58■□□□□ 0.41
CLIP2-202ENST00000361545 NME4O00746 187 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 CACNG3O60359 315 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 ATE1O95260 518 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 HNRNPA0Q13151 305 aaKnown RBP17.58■□□□□ 0.4
CLIP2-202ENST00000361545 OR8H1Q8NGG4 311 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 OR8S1Q8NH09 359 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 LIN28AQ9H9Z2 209 aaKnown RBP17.58■□□□□ 0.4
CLIP2-202ENST00000361545 PARPBPQ9NWS1 579 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 KIAA0355O15063 1070 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 ZNF33BQ06732 778 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 CCDC120Q96HB5 630 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 SDR39U1Q9NRG7 319 aaPredicted RBP17.58■□□□□ 0.4
CLIP2-202ENST00000361545 ZNF69Q9UC07 566 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 GPR52Q9Y2T5 361 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 HHLA1C9JL84 531 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 H3BNC9 293 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 MAGEA6P43360 314 aa17.58■□□□□ 0.4
CLIP2-202ENST00000361545 PIN1Q13526 163 aaPredicted RBP17.58■□□□□ 0.4
CLIP2-202ENST00000361545 RAB39AQ14964 217 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms