RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 MAN2A2P49641 1150 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 CRYZQ08257 329 aaKnown RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 SCGB2A2Q13296 93 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 FAM182AQ5T1J6 154 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 FAM174AQ8TBP5 190 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 PLCE1Q9P212 2302 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 AKAP11Q9UKA4 1901 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 COCHO43405 550 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 ZNF28P17035 718 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 CDK3Q00526 305 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 SYPL2Q5VXT5 272 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 ENPP6Q6UWR7 440 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 SAMD12Q8N8I0 201 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 MAP3K3Q99759 626 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 WACQ9BTA9 647 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 EBF2Q9HAK2 575 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 SIX3O95343 332 aaPredicted RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 NIPAL3Q6P499 406 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 OR51A7Q8NH64 312 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 SECISBP2Q96T21 854 aaKnown RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 CCM2LQ9NUG4 571 aaPredicted RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 CDC123O75794 336 aaPredicted RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 CELP19835 753 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 AK4P27144 223 aaPredicted RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 GCGRP47871 477 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 RAB5BP61020 215 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 LIPKQ5VXJ0 399 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 ACBD7Q8N6N7 88 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 FOXRED1Q96CU9 486 aaPredicted RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 CDC6Q99741 560 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 TAS2R3Q9NYW6 316 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 MTMR11A4FU01 709 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 I3L521 148 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 TMEM63AO94886 807 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 TRUB1Q8WWH5 349 aaKnown RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 MTG2Q9H4K7 406 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 INPP5EQ9NRR6 644 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 A0A0D9SEW6 157 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 SOCS2O14508 198 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 F2P00734 622 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 ADORA3P0DMS8 318 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 ANKK1Q8NFD2 765 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 ZNF317Q96PQ6 595 aaPredicted RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 SYT17Q9BSW7 474 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 HSPB11Q9Y547 144 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 KIAA0355O15063 1070 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 RFPL1O75677 317 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 RAB3AP20336 220 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 HNRNPA2B1P22626 353 aaKnown RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 HK3P52790 923 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 NADK2Q4G0N4 442 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 AMBNQ9NP70 447 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 VNN1O95497 513 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 RPS3P23396 243 aaKnown RBP eCLIP9.23□□□□□ -0.931e-7■■■■□ 20.3
CUX1-203ENST00000360264 OR4N5Q8IXE1 308 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 SYNPOQ8N3V7 929 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 BRI3BPQ8WY22 251 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 NELL2Q99435 816 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 SIX2Q9NPC8 291 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 AURKAO14965 403 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 UCHL1P09936 223 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 LMAN2Q12907 356 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 CLDN19Q8N6F1 224 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 ZNF587Q96SQ5 575 aaPredicted RBP9.22□□□□□ -0.93
CUX1-203ENST00000360264 PAPOLGQ9BWT3 736 aaKnown RBP9.22□□□□□ -0.93
CUX1-203ENST00000360264 GDE1Q9NZC3 331 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 NTRK2Q16620 822 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 AGAP7PQ5VUJ5 663 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 AGAP6Q5VW22 663 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 RELTQ969Z4 430 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 AGAP4Q96P64 663 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 FGFBP2Q9BYJ0 223 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 C11orf98E9PRG8 122 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 SHOXO15266 292 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 TAS2R20P59543 309 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 C17orf50Q8WW18 174 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 MS4A4EQ96PG1 132 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 FOLH1BQ9HBA9 442 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 B3GNT2Q9NY97 397 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 PTPRQQ9UMZ3 2332 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 CD1DP15813 335 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 ID2Q02363 134 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 LSM14AQ8ND56 463 aaKnown RBP9.22□□□□□ -0.93
CUX1-203ENST00000360264 UBXN10Q96LJ8 280 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 HCAR1Q9BXC0 346 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 GALPQ9UBC7 116 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 PRAF2O60831 178 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 JRKO75564 520 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 ALDOBP05062 364 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 RHOP08100 348 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 OR12D1P0DN82 309 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 PPA1Q15181 289 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 FTSJ1Q9UET6 329 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 CYP8B1Q9UNU6 501 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 OTOL1A6NHN0 477 aaPredicted RBP9.22□□□□□ -0.93
CUX1-203ENST00000360264 OR2T1O43869 369 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 CSNK2A1P68400 391 aaPredicted RBP9.22□□□□□ -0.93
CUX1-203ENST00000360264 PCBP2Q15366 365 aaKnown RBP eCLIP9.22□□□□□ -0.931e-6■■■■■ 33.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms