RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 C7orf72A4D263 438 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 FAM227AF5H4B4 570 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 SYT5O00445 386 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 EI24O14681 340 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 DYRK3O43781 588 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 MED26O95402 600 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 MT-ND1P03886 318 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 IFNW1P05000 195 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 FESP07332 822 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 ALOX5P09917 674 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 RPS6KA3P51812 740 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 RAD23AP54725 363 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 SMIM11AP58511 58 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 MRPS35P82673 323 aaKnown RBP12.61□□□□□ -0.39
CCDC197-201ENST00000359253 VLDLRP98155 873 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 MGAT2Q10469 447 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 MERTKQ12866 999 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 ZNHIT3Q15649 155 aaPredicted RBP12.61□□□□□ -0.39
CCDC197-201ENST00000359253 LTB4RQ15722 352 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 MAPK11Q15759 364 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 SYPL1Q16563 259 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 IQCCQ4KMZ1 466 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 GPAT3Q53EU6 434 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 RHBDD2Q6NTF9 364 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 QSOX2Q6ZRP7 698 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 STK32CQ86UX6 486 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 CYP4Z1Q86W10 505 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 GALNT12Q8IXK2 581 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 VWA5B2Q8N398 1253 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 CHDHQ8NE62 594 aaPredicted RBP12.61□□□□□ -0.39
CCDC197-201ENST00000359253 OR7G1Q8NGA0 311 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 OR5D16Q8NGK9 328 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 TFAP2CQ92754 450 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 RIT1Q92963 219 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 ZNF300Q96RE9 604 aaPredicted RBP12.61□□□□□ -0.39
CCDC197-201ENST00000359253 GFM1Q96RP9 751 aaKnown RBP12.61□□□□□ -0.39
CCDC197-201ENST00000359253 PINK1Q9BXM7 581 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 ALOXE3Q9BYJ1 711 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 CXorf21Q9HAI6 301 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 MKKSQ9NPJ1 570 aaPredicted RBP12.61□□□□□ -0.39
CCDC197-201ENST00000359253 BATF3Q9NR55 127 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 TMEM9Q9P0T7 183 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 HCN3Q9P1Z3 774 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 C3orf18Q9UK00 162 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 IFT52Q9Y366 437 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 ORC6Q9Y5N6 252 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 ENPP4Q9Y6X5 453 aa12.61□□□□□ -0.39
CCDC197-201ENST00000359253 IGHV5-10-1A0A0J9YXX1 117 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 A0A1W2PS29 197 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 A8MU76 341 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 PDLIM1O00151 329 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 NTN3O00634 580 aaPredicted RBP12.6□□□□□ -0.39
CCDC197-201ENST00000359253 ONECUT2O95948 504 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 ALPLP05186 524 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 CDH2P19022 906 aaPredicted RBP12.6□□□□□ -0.39
CCDC197-201ENST00000359253 CD247P20963 164 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 FBLP22087 321 aaKnown RBP12.6□□□□□ -0.39
CCDC197-201ENST00000359253 ALAS2P22557 587 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 MAP3K8P41279 467 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 XCR1P46094 333 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 HMGA2P52926 109 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 PPP2R2BQ00005 443 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 FOXK2Q01167 660 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 KCNAB1Q14722 419 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 PDK3Q15120 406 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 ZSWIM7Q19AV6 140 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 TTC23Q5W5X9 447 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 ZNF574Q6ZN55 896 aaPredicted RBP12.6□□□□□ -0.39
CCDC197-201ENST00000359253 SLC44A2Q8IWA5 706 aaPredicted RBP12.6□□□□□ -0.39
CCDC197-201ENST00000359253 DHRSXQ8N5I4 330 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 MAGEE2Q8TD90 523 aaPredicted RBP12.6□□□□□ -0.39
CCDC197-201ENST00000359253 GATA6Q92908 595 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 SLC35A4Q96G79 324 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 C16orf58Q96GQ5 468 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 COL21A1Q96P44 957 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 ANKRD60Q9BZ19 345 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 TGIF2Q9GZN2 237 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 NDUFAF4Q9P032 175 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 NDOR1Q9UHB4 597 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 RARRES3Q9UL19 164 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 ABCG2Q9UNQ0 655 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 ZNF232Q9UNY5 417 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 CFL2Q9Y281 166 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 SLC9A8Q9Y2E8 581 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 SAMHD1Q9Y3Z3 626 aaKnown RBP12.6□□□□□ -0.39
CCDC197-201ENST00000359253 SCN3AQ9NY46 2000 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 DSPPQ9NZW4 1301 aa12.6□□□□□ -0.39
CCDC197-201ENST00000359253 GOLGA4Q13439 2230 aaKnown RBP12.6□□□□□ -0.39
CCDC197-201ENST00000359253 PRAMEF27A3QJZ7 478 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 hCG_2039718K7EN88 272 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 PRAMEF2O60811 474 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 NKX2-2O95096 273 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 ALBP02768 609 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 OPN1SWP03999 348 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 ALPPP05187 535 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 CYC1P08574 325 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 THRBP10828 461 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 MYF5P13349 255 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 PRKAR1BP31321 381 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 CAPGP40121 348 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms