RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 ANKRD46Q86W74 232 aa22.43■■□□□ 1.18
ALKAL1-201ENST00000358543 ZNF227Q86WZ6 799 aa22.43■■□□□ 1.18
ALKAL1-201ENST00000358543 PTRH1Q86Y79 214 aaKnown RBP22.43■■□□□ 1.18
ALKAL1-201ENST00000358543 FUNDC1Q8IVP5 155 aa22.43■■□□□ 1.18
ALKAL1-201ENST00000358543 OR56A1Q8NGH5 318 aa22.43■■□□□ 1.18
ALKAL1-201ENST00000358543 OR4A15Q8NGL6 344 aa22.43■■□□□ 1.18
ALKAL1-201ENST00000358543 C10orf82Q8WW14 230 aa22.43■■□□□ 1.18
ALKAL1-201ENST00000358543 GIMAP5Q96F15 307 aa22.43■■□□□ 1.18
ALKAL1-201ENST00000358543 SGCZQ96LD1 299 aa22.43■■□□□ 1.18
ALKAL1-201ENST00000358543 MS4A4EQ96PG1 132 aa22.43■■□□□ 1.18
ALKAL1-201ENST00000358543 SIGLEC12Q96PQ1 595 aa22.43■■□□□ 1.18
ALKAL1-201ENST00000358543 LMF2Q9BU23 707 aaKnown RBP22.43■■□□□ 1.18
ALKAL1-201ENST00000358543 NSRP1Q9H0G5 558 aaKnown RBP22.43■■□□□ 1.18
ALKAL1-201ENST00000358543 HPF1Q9NWY4 346 aa22.43■■□□□ 1.18
ALKAL1-201ENST00000358543 CAPN14A8MX76 684 aa22.42■■□□□ 1.18
ALKAL1-201ENST00000358543 FBXO45P0C2W1 286 aa22.42■■□□□ 1.18
ALKAL1-201ENST00000358543 MAP3K8P41279 467 aa22.42■■□□□ 1.18
ALKAL1-201ENST00000358543 PRKAG1P54619 331 aa22.42■■□□□ 1.18
ALKAL1-201ENST00000358543 PSG6Q00889 435 aa22.42■■□□□ 1.18
ALKAL1-201ENST00000358543 RCAN2Q14206 197 aa22.42■■□□□ 1.18
ALKAL1-201ENST00000358543 ZNF791Q3KP31 576 aaPredicted RBP22.42■■□□□ 1.18
ALKAL1-201ENST00000358543 RPUSD3Q6P087 351 aaKnown RBP22.42■■□□□ 1.18
ALKAL1-201ENST00000358543 BHLHB9Q6PI77 547 aa22.42■■□□□ 1.18
ALKAL1-201ENST00000358543 CYP4Z2PQ8N1L4 340 aa22.42■■□□□ 1.18
ALKAL1-201ENST00000358543 SPACA9Q96E40 222 aaPredicted RBP22.42■■□□□ 1.18
ALKAL1-201ENST00000358543 ZCCHC3Q9NUD5 404 aaKnown RBP22.42■■□□□ 1.18
ALKAL1-201ENST00000358543 NPFFR2Q9Y5X5 522 aa22.42■■□□□ 1.18
ALKAL1-201ENST00000358543 NME6O75414 186 aaPredicted RBP22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 CPSF4O95639 269 aaKnown RBP22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 CD46P15529 392 aa22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 DRD4P21917 467 aa22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 ST13P50502 369 aaKnown RBP22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 KCNK10P57789 538 aa22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 ZNF155Q12901 538 aaPredicted RBP22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 ZNHIT3Q15649 155 aaPredicted RBP22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 SPDYE7PQ495Y7 208 aa22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 IL20RBQ6UXL0 311 aa22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 CPLX4Q7Z7G2 160 aa22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 CDRT4Q8N9R6 151 aa22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 GOLM1Q8NBJ4 401 aa22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 TMEM125Q96AQ2 219 aa22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 SCMH1Q96GD3 660 aa22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 RMND5AQ9H871 391 aa22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 CCDC167Q9P0B6 97 aa22.41■■□□□ 1.18
ALKAL1-201ENST00000358543 EIF4E1BA6NMX2 242 aaKnown RBP22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 SORBS2O94875 1100 aaKnown RBP22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 SOX30O94993 753 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 UQCRC2P22695 453 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 ABCD3P28288 659 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 PRIM2P49643 509 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 TMED10P49755 219 aaKnown RBP22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 CORO7P57737 925 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 SF3A3Q12874 501 aaKnown RBP eCLIP22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 NTRK2Q16620 822 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 VPS26BQ4G0F5 336 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 AGKQ53H12 422 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 ZNF766Q5HY98 468 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 EXOSC6Q5RKV6 272 aaKnown RBP22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 SLC25A25Q6KCM7 469 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 MFSD12Q6NUT3 480 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 NPSR1Q6W5P4 371 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 RTL4Q6ZR62 310 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 SPATA21Q7Z572 469 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 Q8NA96 180 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 C5orf34Q96MH7 638 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 PANX1Q96RD7 426 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 ELAC2Q9BQ52 826 aaKnown RBP22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 TIMMDC1Q9NPL8 285 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 SLC52A3Q9NQ40 469 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 SERHLQ9NQF3 203 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 GPATCH2Q9NW75 528 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 GIN1Q9NXP7 522 aa22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 RALYQ9UKM9 306 aaKnown RBP22.4■■□□□ 1.18
ALKAL1-201ENST00000358543 SLC25A12O75746 678 aa22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 HMGN2P05204 90 aaKnown RBP22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 SP1P08047 785 aa22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 MAPKAPK3Q16644 382 aa22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 CYP27C1Q4G0S4 372 aa22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 TIGD2Q4W5G0 525 aa22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 SZRD1Q7Z422 152 aa22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 SLC44A2Q8IWA5 706 aaPredicted RBP22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 SLC34A3Q8N130 599 aa22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 ZNF843Q8N446 348 aa22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 TRIML2Q8N7C3 387 aa22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 TSPEARQ8WU66 669 aa22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 VPS33AQ96AX1 596 aa22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 SPDL1Q96EA4 605 aa22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 ITCHQ96J02 903 aa22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 SH2D2AQ9NP31 389 aa22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 PCDHGA10Q9Y5H3 936 aa22.39■■□□□ 1.17
ALKAL1-201ENST00000358543 CCDC154A6NI56 674 aa22.38■■□□□ 1.17
ALKAL1-201ENST00000358543 SNX3O60493 162 aa22.38■■□□□ 1.17
ALKAL1-201ENST00000358543 NKX2-2O95096 273 aa22.38■■□□□ 1.17
ALKAL1-201ENST00000358543 ADSLP30566 484 aaPredicted RBP22.38■■□□□ 1.17
ALKAL1-201ENST00000358543 GAB1Q13480 694 aa22.38■■□□□ 1.17
ALKAL1-201ENST00000358543 TP53BP2Q13625 1128 aa22.38■■□□□ 1.17
ALKAL1-201ENST00000358543 INAQ16352 499 aa22.38■■□□□ 1.17
ALKAL1-201ENST00000358543 NNATQ16517 81 aa22.38■■□□□ 1.17
ALKAL1-201ENST00000358543 MDGA2Q7Z553 956 aa22.38■■□□□ 1.17
ALKAL1-201ENST00000358543 TMEM178AQ8NBL3 297 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms