RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 SNX2O60749 519 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 GPX2P18283 190 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 BCKDHBP21953 392 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 GRPRP30550 384 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 NANOS3P60323 173 aaKnown RBP5.23□□□□□ -1.57
CD47-201ENST00000355354 ATP6V0D1P61421 351 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 SRSF3P84103 164 aaKnown RBP5.23□□□□□ -1.57
CD47-201ENST00000355354 RBBP5Q15291 538 aaKnown RBP5.23□□□□□ -1.57
CD47-201ENST00000355354 SKIV2LQ15477 1246 aaKnown RBP5.23□□□□□ -1.57
CD47-201ENST00000355354 BORAQ6PGQ7 559 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 NCEH1Q6PIU2 408 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 Q6ZTK2 550 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 OR52B4Q8NGK2 314 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 OR4C3Q8NH37 302 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 FUBP3Q96I24 572 aaKnown RBP eCLIP5.23□□□□□ -1.57
CD47-201ENST00000355354 KLHL15Q96M94 604 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 PSME2Q9UL46 239 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 SLC27A6Q9Y2P4 619 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 IFT52Q9Y366 437 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 A0A0G2JK05 382 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 TMEM8BA6NDV4 472 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 NDST3O95803 873 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 C6P13671 934 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 DRD5P21918 477 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 GJA4P35212 333 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 EIF2B2P49770 351 aaKnown RBP5.23□□□□□ -1.57
CD47-201ENST00000355354 CCR6P51684 374 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 DNAJB13P59910 316 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 ERVK-8P63133 956 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 LMNB2Q03252 620 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 VEPH1Q14D04 833 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 MAPKAPK3Q16644 382 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 ODF4Q2M2E3 257 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 ARSIQ5FYB1 569 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 KRT80Q6KB66 452 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 FAM45BPQ6NSW5 357 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 MRNIPQ6NTE8 343 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 GET4Q7L5D6 327 aaPredicted RBP5.23□□□□□ -1.57
CD47-201ENST00000355354 VRK2Q86Y07 508 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 DNAJC22Q8N4W6 341 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 FAM45AQ8TCE6 357 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 RLN3Q8WXF3 142 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 SLC9A6Q92581 669 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 TRIM11Q96F44 468 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 NODALQ96S42 347 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 BCL7BQ9BQE9 202 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 LANCL2Q9NS86 450 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 KLK11Q9UBX7 282 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 MOSPD1Q9UJG1 213 aa5.23□□□□□ -1.57
CD47-201ENST00000355354 A0A1W2PQ72 361 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 MEIS3P1A6NDR6 274 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 SLC38A8A6NNN8 435 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 C9JQL5 133 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 MAN2B1O00754 1011 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 KIAA0513O60268 411 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 MATN4O95460 622 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 SIX6O95475 246 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 MAOBP27338 520 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 SLC15A1P46059 708 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 EFNB2P52799 333 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 MFAP5Q13361 173 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 MRM1Q6IN84 353 aaKnown RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 LINC00523Q86TU6 105 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 CPXM2Q8N436 756 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 OXR1Q8N573 874 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 TCEANCQ8N8B7 351 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 ZNF675Q8TD23 568 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 B3GNT4Q9C0J1 378 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 NANSQ9NR45 359 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 MS4A12Q9NXJ0 267 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 MAT2BQ9NZL9 334 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 FTSJ1Q9UET6 329 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 OSGIN1Q9UJX0 560 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 RAB23Q9ULC3 237 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 AUP1Q9Y679 476 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 IGKV1D-43A0A0B4J1Z2 117 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 TRBV5-4A0A0C4DH59 114 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 CCDC154A6NI56 674 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 TIMM44O43615 452 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 MMP20O60882 483 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 ATP5A1P25705 553 aaKnown RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 RGS6P49758 472 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 ALDH3A2P51648 485 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 CLCNKAP51800 687 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 TAS2R50P59544 299 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 RPS11P62280 158 aaKnown RBP eCLIP5.22□□□□□ -1.57
CD47-201ENST00000355354 SNRPFP62306 86 aaKnown RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 ILF2Q12905 390 aaKnown RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 MTA1Q13330 715 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 RFTN1Q14699 578 aaPredicted RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 ZNF829Q3KNS6 432 aaPredicted RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 CCDC153Q494R4 210 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 C6orf132Q5T0Z8 1188 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 ADGRF1Q5T601 910 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 C17orf107Q6ZR85 190 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 TRIM46Q7Z4K8 759 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 RAB3IL1Q8TBN0 382 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 GATAD2BQ8WXI9 593 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 FAM3CQ92520 227 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 CCDC120Q96HB5 630 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms