RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 J3KTA2 159 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 KPNA3O00505 521 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-203ENST00000349748 PAK4O96013 591 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-203ENST00000349748 OPN1SWP03999 348 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 EIF4EP06730 217 aaKnown RBP10.07□□□□□ -0.8
CAPN3-203ENST00000349748 ZNF865P0CJ78 1059 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-203ENST00000349748 ODC1P11926 461 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 CPEP16870 476 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 G0S2P27469 103 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 SNX16P57768 344 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 E2F1Q01094 437 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 ILKQ13418 452 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 GANABQ14697 944 aaKnown RBP10.07□□□□□ -0.8
CAPN3-203ENST00000349748 AMHR2Q16671 573 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 FAM187BQ17R55 369 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 SLC5A12Q1EHB4 618 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 PLK5Q496M5 336 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 CCDC157Q569K6 752 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 IDNKQ5T6J7 187 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 MFSD14CQ5VZR4 134 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 C3orf33Q6P1S2 294 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 SLC9B2Q86UD5 537 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 HDDC3Q8N4P3 179 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 PLA2G15Q8NCC3 412 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 OR4K3Q96R72 315 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 DUSP16Q9BY84 665 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 NFKBIZQ9BYH8 718 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 CLEC4AQ9UMR7 237 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 CA5BQ9Y2D0 317 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 NME7Q9Y5B8 376 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 IGKV6D-21A0A0A0MT36 114 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 CXorf65A6NEN9 183 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 MANSC4A6NHS7 340 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-203ENST00000349748 PPEF2O14830 753 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 OIP5O43482 229 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 BRINP1O60477 761 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 KCNK5O95279 499 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 SOX14O95416 240 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 PPP3CBP16298 524 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 NPR2P20594 1047 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 SEC61A1P61619 476 aaKnown RBP10.07□□□□□ -0.8
CAPN3-203ENST00000349748 MEF2AQ02078 507 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-203ENST00000349748 DHODHQ02127 395 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 POU4F2Q12837 409 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 SLC25A52Q3SY17 297 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 QSOX2Q6ZRP7 698 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 CMIPQ8IY22 773 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 SLC43A2Q8N370 569 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 SYNPOQ8N3V7 929 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 TRAPPC12Q8WVT3 735 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 TCEAL4Q96EI5 215 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 SOX7Q9BT81 388 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 TMED9Q9BVK6 235 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 TSSK6Q9BXA6 273 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 CLMPQ9H6B4 373 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 MINDY3Q9H8M7 445 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 SARS2Q9NP81 518 aaKnown RBP10.07□□□□□ -0.8
CAPN3-203ENST00000349748 TEX10Q9NXF1 929 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-203ENST00000349748 PISDQ9UG56 409 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 UBQLN1Q9UMX0 589 aaKnown RBP10.07□□□□□ -0.8
CAPN3-203ENST00000349748 NEU3Q9UQ49 428 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 GSTK1Q9Y2Q3 226 aa10.07□□□□□ -0.8
CAPN3-203ENST00000349748 PHIPQ8WWQ0 1821 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 RHPN2P1A8MT19 583 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 AGAP14A8MT82 685 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 TLR5O60602 858 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 PRAMEF2O60811 474 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 LRATO95237 230 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 SOD1P00441 154 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 PIPP12273 146 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-203ENST00000349748 ZNF44P15621 663 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 SPAM1P38567 509 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 RIPPLY1Q0D2K3 151 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 GINS1Q14691 196 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 UBXN2BQ14CS0 331 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 SEZ6L2Q6UXD5 910 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 BTN2A1Q7KYR7 527 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 TOMM5Q8N4H5 51 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 CHTF18Q8WVB6 975 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 HMGB4Q8WW32 186 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 KAT2AQ92830 837 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 MAL2Q969L2 176 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 NEU1Q99519 415 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 RSRP1Q9BUV0 290 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 GGACTQ9BVM4 153 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 LINC00597Q9H2U6 94 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 BRD9Q9H8M2 597 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 TBC1D17Q9HA65 648 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 FLRT1Q9NZU1 646 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 MRPL15Q9P015 296 aaKnown RBP10.06□□□□□ -0.8
CAPN3-203ENST00000349748 SF3B6Q9Y3B4 125 aaKnown RBP10.06□□□□□ -0.8
CAPN3-203ENST00000349748 C1orf196B1AJZ1 125 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 RFXAPO00287 272 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 TCAPO15273 167 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 GALR3O60755 368 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-203ENST00000349748 SLC25A27O95847 323 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 IQCF3P0C7M6 154 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 ANXA8P13928 327 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 HSD3B1P14060 373 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 ADRA1AP35348 466 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms