RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 MECP2P51608 486 aaKnown RBP11.52□□□□□ -0.56
COL12A1-202ENST00000345356 SORDQ00796 357 aa11.52□□□□□ -0.56
COL12A1-202ENST00000345356 SELENBP1Q13228 472 aa11.52□□□□□ -0.56
COL12A1-202ENST00000345356 ELOAQ14241 798 aaKnown RBP11.52□□□□□ -0.56
COL12A1-202ENST00000345356 VARS2Q5ST30 1063 aaKnown RBP11.52□□□□□ -0.56
COL12A1-202ENST00000345356 ANKLE1Q8NAG6 615 aa11.52□□□□□ -0.56
COL12A1-202ENST00000345356 PXYLP1Q8TE99 480 aa11.52□□□□□ -0.56
COL12A1-202ENST00000345356 LRRC46Q96FV0 321 aa11.52□□□□□ -0.56
COL12A1-202ENST00000345356 TMEM19Q96HH6 336 aa11.52□□□□□ -0.56
COL12A1-202ENST00000345356 PKMYT1Q99640 499 aa11.52□□□□□ -0.56
COL12A1-202ENST00000345356 FBXO8Q9NRD0 319 aa11.52□□□□□ -0.56
COL12A1-202ENST00000345356 PSORS1C1Q9UIG5 152 aa11.52□□□□□ -0.56
COL12A1-202ENST00000345356 HSD17B2P37059 387 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 PIGAP37287 484 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 DAPP51397 102 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 P2RX3P56373 397 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 SP2Q02086 613 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 VEZF1Q14119 521 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 CHRFAM7AQ494W8 412 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 CPZQ66K79 652 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 KIAA1211LQ6NV74 962 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 RPL13AP3Q6NVV1 102 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 C6orf120Q7Z4R8 191 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 PXKQ7Z7A4 578 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 GALNT13Q8IUC8 556 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 SCGB1C1Q8TD33 95 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 GJD2Q9UKL4 321 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 SCML2Q9UQR0 700 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 NAALAD2Q9Y3Q0 740 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 A3GALT2U3KPV4 340 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 SLC38A8A6NNN8 435 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 ACOT7O00154 380 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 CPNE6O95741 557 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 IL12BP29460 328 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 PPM1AP35813 382 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 NUDT1P36639 197 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 GLP1RP43220 463 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 KIAA1024LP59773 190 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 CDC20Q12834 499 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 MAP4K2Q12851 820 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 SERPINA11Q86U17 422 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 ARFGAP1Q8N6T3 406 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 SLC25A44Q96H78 314 aaPredicted RBP11.52□□□□□ -0.57
COL12A1-202ENST00000345356 CNN2Q99439 309 aaKnown RBP11.52□□□□□ -0.57
COL12A1-202ENST00000345356 SULT4A1Q9BR01 284 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 SDHAF2Q9NX18 166 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 TAS2R16Q9NYV7 291 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 PEX14O75381 377 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 LALBAP00709 142 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 PRNPP04156 253 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 ZBTB48P10074 688 aaPredicted RBP11.52□□□□□ -0.57
COL12A1-202ENST00000345356 RBMS1P29558 406 aaKnown RBP11.52□□□□□ -0.57
COL12A1-202ENST00000345356 PRSS3P35030 304 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 HERV-K104P61576 105 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 CYCSP99999 105 aaKnown RBP11.52□□□□□ -0.57
COL12A1-202ENST00000345356 NKPD1Q17RQ9 610 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 ZNF425Q6IV72 752 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 APIPQ96GX9 242 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 ZNF558Q96NG5 402 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 TRIB3Q96RU7 358 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 PSD2Q9BQI7 771 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 TGIF2Q9GZN2 237 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 SLC5A7Q9GZV3 580 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 ATP13A2Q9NQ11 1180 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 DHDHQ9UQ10 334 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 RCE1Q9Y256 329 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 FADS1O60427 444 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 ERCC1P07992 297 aaPredicted RBP11.52□□□□□ -0.57
COL12A1-202ENST00000345356 PREPP48147 710 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 RAB40BQ12829 278 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 ZNF585AQ6P3V2 769 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.52□□□□□ -0.57
COL12A1-202ENST00000345356 CCDC54Q8NEL0 328 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 BRIX1Q8TDN6 353 aaKnown RBP11.52□□□□□ -0.57
COL12A1-202ENST00000345356 ST7LQ8TDW4 575 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 GSX2Q9BZM3 304 aa11.52□□□□□ -0.57
COL12A1-202ENST00000345356 TXNL4BQ9NX01 149 aaKnown RBP11.52□□□□□ -0.57
COL12A1-202ENST00000345356 TMX2-CTNND1H3BSU7 103 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 CRYZQ08257 329 aaKnown RBP11.51□□□□□ -0.57
COL12A1-202ENST00000345356 NFATC2Q13469 925 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 LRRC32Q14392 662 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 C18orf63Q68DL7 685 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 LSMEM2Q8N112 164 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 TERB2Q8NHR7 220 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 SLC2A13Q96QE2 648 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 PADI3Q9ULW8 664 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 XRN1Q8IZH2 1706 aaKnown RBP11.51□□□□□ -0.57
COL12A1-202ENST00000345356 PRSS56P0CW18 603 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 GNSP15586 552 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 HSD3B2P26439 372 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 RAB11BQ15907 218 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 DHRS4L2Q6PKH6 230 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 SUN3Q8TAQ9 357 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 MYLIPQ8WY64 445 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 ZBED3Q96IU2 234 aaPredicted RBP11.51□□□□□ -0.57
COL12A1-202ENST00000345356 C12orf57Q99622 126 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 RNF39Q9H2S5 420 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 KCNK12Q9HB15 430 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 OSGIN1Q9UJX0 560 aa11.51□□□□□ -0.57
COL12A1-202ENST00000345356 SLC6A5Q9Y345 797 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms