RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 CDH12P55289 794 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 KCNJ10P78508 379 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 HTRA4P83105 476 aaPredicted RBP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 DLX2Q07687 328 aaPredicted RBP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 RBBP4Q09028 425 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 TTLL9Q3SXZ7 439 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 TMEM88Q6PEY1 159 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 GPSM1Q86YR5 675 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 ARHGAP12Q8IWW6 846 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 C2CD4CQ8TF44 421 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 MRPL48Q96GC5 212 aaKnown RBP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 CHIAQ9BZP6 476 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 DNTTIP1Q9H147 329 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 POPDC3Q9HBV1 291 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 NIT2Q9NQR4 276 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 LATS2Q9NRM7 1088 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 TTLL8A6PVC2 850 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 CHURC1-FNTBB4DL54 471 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 L7N2F9 121 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 ADAMDEC1O15204 470 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 CASC3O15234 703 aaKnown RBP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 GPR39O43194 453 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 F11P03951 625 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 TCRBP04435 133 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 H2AFB1P0C5Y9 115 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 H2AFB2P0C5Z0 115 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 PIPP12273 146 aaPredicted RBP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 CXCL2P19875 107 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 ACADLP28330 430 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 KCNJ3P48549 501 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 SELENOPP49908 381 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 RHOAP61586 193 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 RPS25P62851 125 aaKnown RBP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 SPIBQ01892 262 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 SCAPQ12770 1279 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 COL9A2Q14055 689 aaPredicted RBP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 ZSWIM7Q19AV6 140 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 SPIN4Q56A73 249 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 TCTE1Q5JU00 501 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 RAET1GQ6H3X3 334 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 MCATQ8IVS2 390 aaKnown RBP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 TCEAL3Q969E4 200 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 TIFAQ96CG3 184 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 ARL5BQ96KC2 179 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 THAP7Q9BT49 309 aaPredicted RBP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 MED18Q9BUE0 208 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 SEMA4CQ9C0C4 833 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 SPRTNQ9H040 489 aaPredicted RBP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 SAP130Q9H0E3 1048 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 DPAGT1Q9H3H5 408 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 IL21Q9HBE4 155 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 ARNT2Q9HBZ2 717 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 TDP1Q9NUW8 608 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 EXTL2Q9UBQ6 330 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 CCL27Q9Y4X3 112 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 MYO15AQ9UKN7 3530 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 FRMPD3Q5JV73 1810 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 WASH3PC4AMC7 463 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 D6RAR5 112 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 SMAD6O43541 496 aaKnown RBP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 RGS14O43566 566 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 KLK8O60259 260 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 MAFKO60675 156 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 HIST1H2AGP0C0S8 130 aaPredicted RBP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 HIST1H2ADP20671 130 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 PTBP1P26599 531 aaKnown RBP eCLIP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 PRKAR1BP31321 381 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 CD70P32970 193 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 MMP12P39900 470 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 SRP9P49458 86 aaKnown RBP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 RAB8AP61006 207 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 PUM1Q14671 1186 aaKnown RBP eCLIP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 ZNF528Q3MIS6 628 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 HIST2H2AA3Q6FI13 130 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 MRNIPQ6NTE8 343 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 SERPINA11Q86U17 422 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 PROKR2Q8NFJ6 384 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 OR1M1Q8NGA1 313 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 OR4A15Q8NGL6 344 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 HSD17B8Q92506 261 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 RFT1Q96AA3 541 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 HIST1H2AHQ96KK5 128 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 DMRTA2Q96SC8 542 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 GPR21Q99679 349 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 HIST1H2AJQ99878 128 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 ATF6BQ99941 703 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 CMSS1Q9BQ75 279 aaKnown RBP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 ZNF251Q9BRH9 671 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 SARS2Q9NP81 518 aaKnown RBP8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 C11orf16Q9NQ32 467 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 PRDM9Q9NQV7 894 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 TAS2R13Q9NYV9 303 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 OR6C2Q9NZP2 312 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 PCDHB9Q9Y5E1 797 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 RAI2Q9Y5P3 530 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 MYO10Q9HD67 2058 aa8.53□□□□□ -1.04
AC008543.1-201ENST00000344893 RALGAPA2Q2PPJ7 1873 aa8.52□□□□□ -1.04
AC008543.1-201ENST00000344893 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.52□□□□□ -1.05
AC008543.1-201ENST00000344893 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.52□□□□□ -1.05
AC008543.1-201ENST00000344893 CLIC1O00299 241 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms