RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 CSTBP04080 98 aaKnown RBP17.19■□□□□ 0.34
SMC4-201ENST00000344722 SDC1P18827 310 aa17.19■□□□□ 0.34
SMC4-201ENST00000344722 MAOAP21397 527 aa17.19■□□□□ 0.34
SMC4-201ENST00000344722 HES5Q5TA89 166 aa17.19■□□□□ 0.34
SMC4-201ENST00000344722 NADSYN1Q6IA69 706 aa17.19■□□□□ 0.34
SMC4-201ENST00000344722 FRMPD2BQ6IN97 320 aa17.19■□□□□ 0.34
SMC4-201ENST00000344722 PXKQ7Z7A4 578 aa17.19■□□□□ 0.34
SMC4-201ENST00000344722 RASGEF1AQ8N9B8 481 aa17.19■□□□□ 0.34
SMC4-201ENST00000344722 ACBD4Q8NC06 268 aa17.19■□□□□ 0.34
SMC4-201ENST00000344722 ATOH8Q96SQ7 321 aa17.19■□□□□ 0.34
SMC4-201ENST00000344722 B4GALT6Q9UBX8 382 aa17.19■□□□□ 0.34
SMC4-201ENST00000344722 OR2A25A4D2G3 310 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 CCL16O15467 120 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 RPL17P18621 184 aaKnown RBP17.18■□□□□ 0.34
SMC4-201ENST00000344722 TUBG1P23258 451 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 HMGCLP35914 325 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 CAPZA1P52907 286 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 RAB11BQ15907 218 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 CCDC116Q8IYX3 515 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 FBXO15Q8NCQ5 510 aaPredicted RBP17.18■□□□□ 0.34
SMC4-201ENST00000344722 C16orf78Q8WTQ4 265 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 C11orf54Q9H0W9 315 aaPredicted RBP17.18■□□□□ 0.34
SMC4-201ENST00000344722 RXFP3Q9NSD7 469 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 CLCNKAP51800 687 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 OPCMLQ14982 345 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 NRROSQ86YC3 692 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 OR56B4Q8NH76 319 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 PMEPA1Q969W9 287 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 ORAI3Q9BRQ5 295 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 GMPR2Q9P2T1 348 aaKnown RBP17.18■□□□□ 0.34
SMC4-201ENST00000344722 SCDO00767 359 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 DRD2P14416 443 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 PPP3CBP16298 524 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 CCL23P55773 120 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 ILF3Q12906 894 aaKnown RBP eCLIP17.18■□□□□ 0.348e-14■■■■■ 40.3
SMC4-201ENST00000344722 ELOAQ14241 798 aaKnown RBP17.18■□□□□ 0.34
SMC4-201ENST00000344722 CEP68Q76N32 757 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 PSD2Q9BQI7 771 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 SLC6A16Q9GZN6 736 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 BRF2Q9HAW0 419 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 ITGA5P08648 1049 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 PRSS56P0CW18 603 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 CAMLGP49069 296 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 POU6F2P78424 691 aaPredicted RBP17.18■□□□□ 0.34
SMC4-201ENST00000344722 TMEM115Q12893 351 aaPredicted RBP17.18■□□□□ 0.34
SMC4-201ENST00000344722 PGAP1Q75T13 922 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 ARL5BQ96KC2 179 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 NTMT1Q9BV86 223 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 ACTL8Q9H568 366 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 WDR26Q9H7D7 661 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 NOX3Q9HBY0 568 aa17.18■□□□□ 0.34
SMC4-201ENST00000344722 DUS2Q9NX74 493 aaKnown RBP17.18■□□□□ 0.34
SMC4-201ENST00000344722 CICQ96RK0 1608 aaPredicted RBP17.18■□□□□ 0.34
SMC4-201ENST00000344722 GLOD5A6NK44 160 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 CACNG3O60359 315 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 APODP05090 189 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 CPA6Q8N4T0 437 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 ANKLE1Q8NAG6 615 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 HRASLS5Q96KN8 279 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 SLC12A9Q9BXP2 914 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 RBPJLQ9UBG7 517 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 MT-ND4P03905 459 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 ACP5P13686 325 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 VSX2P58304 361 aaPredicted RBP17.17■□□□□ 0.34
SMC4-201ENST00000344722 MINDY4Q4G0A6 757 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 MANEALQ5VSG8 457 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 Q6ZVU0 165 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 BRIX1Q8TDN6 353 aaKnown RBP17.17■□□□□ 0.34
SMC4-201ENST00000344722 SETD7Q8WTS6 366 aaKnown RBP17.17■□□□□ 0.34
SMC4-201ENST00000344722 GIMAP1Q8WWP7 306 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 METTL21AQ8WXB1 218 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 ZNF583Q96ND8 569 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 YARS2Q9Y2Z4 477 aaKnown RBP17.17■□□□□ 0.34
SMC4-201ENST00000344722 A0A0U1RQF3 1178 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 C2orf78A6NCI8 922 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 C2orf74A8MZ97 194 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 PFKMP08237 780 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 TPT1P13693 172 aaKnown RBP17.17■□□□□ 0.34
SMC4-201ENST00000344722 GNSP15586 552 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 INHBEP58166 350 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 CHRFAM7AQ494W8 412 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 CHRDL2Q6WN34 429 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 CFAP77Q6ZQR2 320 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 ZNF565Q8N9K5 539 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 OR14C36Q8NHC7 312 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 DGAT2Q96PD7 388 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 NPIPA5E9PKD4 350 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 TSPAN15O95858 294 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 KCNC1P48547 511 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 TBL1XR1Q9BZK7 514 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 RPS10P5Q9NQ39 176 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 WASH6PQ9NQA3 447 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 NPIPA1Q9UND3 350 aa17.17■□□□□ 0.34
SMC4-201ENST00000344722 A0A1W2PPL8 197 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 PTHP01270 115 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 CD3GP09693 182 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 PRSS3P35030 304 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 LSSP48449 732 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 TBPL1P62380 186 aa17.16■□□□□ 0.34
SMC4-201ENST00000344722 UHRF1Q96T88 793 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms