RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 GPR143P51810 404 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 NFIXQ14938 502 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 GTDC1Q4AE62 458 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 PPP1R26Q5T8A7 1209 aaPredicted RBP5.9□□□□□ -1.47
VCAN-203ENST00000343200 FOXR2Q6PJQ5 311 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 CEACAM20Q6UY09 585 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 GRAPLQ8TC17 118 aaPredicted RBP5.9□□□□□ -1.47
VCAN-203ENST00000343200 TSPEARQ8WU66 669 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 UPRTQ96BW1 309 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 AGO3Q9H9G7 860 aaKnown RBP5.9□□□□□ -1.47
VCAN-203ENST00000343200 ATP13A2Q9NQ11 1180 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 PCDHB3Q9Y5E6 796 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 HEBP2Q9Y5Z4 205 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 CEMIPQ8WUJ3 1361 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 SLC12A8A0AV02 714 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 A6NHS1 94 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 PHYHO14832 338 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 MMP7P09237 267 aaPredicted RBP5.9□□□□□ -1.47
VCAN-203ENST00000343200 SLC35G6P0C7Q6 338 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 GSK3BP49841 420 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 KCNAB2Q13303 367 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 ZNF266Q14584 549 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 RELL1Q8IUW5 271 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 SULF2Q8IWU5 870 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 OR4F6Q8NGB9 312 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 THEM6Q8WUY1 208 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 GGHQ92820 318 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 ZBTB8AQ96BR9 441 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 TIFAQ96CG3 184 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 MSI2Q96DH6 328 aaKnown RBP5.9□□□□□ -1.47
VCAN-203ENST00000343200 SCLYQ96I15 445 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 OR2AG1Q9H205 316 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 C12orf10Q9HB07 376 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 CDH20Q9HBT6 801 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 GPATCH2LQ9NWQ4 482 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 C1orf123Q9NWV4 160 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 LSM5Q9Y4Y9 91 aaKnown RBP5.9□□□□□ -1.47
VCAN-203ENST00000343200 ZNF608Q9ULD9 1512 aaPredicted RBP5.9□□□□□ -1.47
VCAN-203ENST00000343200 SLC22A20A6NK97 555 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 PHOX2AO14813 284 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 SLC25A14O95258 325 aaPredicted RBP5.9□□□□□ -1.47
VCAN-203ENST00000343200 SIX6O95475 246 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 ALDH2P05091 517 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 MASP1P48740 699 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 HOXA1P49639 335 aaPredicted RBP5.9□□□□□ -1.47
VCAN-203ENST00000343200 LAMTOR4Q0VGL1 99 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 ST3GAL3Q11203 375 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 PPM1JQ5JR12 505 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 CD300LGQ6UXG3 332 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 OTOP3Q7RTS5 596 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 C14orf80Q86SX3 495 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 TOP6BLQ8N6T0 577 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 OR13C9Q8NGT0 318 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 GAL3ST4Q96RP7 486 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 TM7SF3Q9NS93 570 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 SMOXQ9NWM0 555 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 DNMT3LQ9UJW3 386 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 YTHDF2Q9Y5A9 579 aaKnown RBP5.9□□□□□ -1.47
VCAN-203ENST00000343200 RREB1Q92766 1687 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 SOX14O95416 240 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 HNRNPA2B1P22626 353 aaKnown RBP5.9□□□□□ -1.47
VCAN-203ENST00000343200 MC4RP32245 332 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 FOXN2P32314 431 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 FASLGP48023 281 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 OR2B8PP59922 312 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 CDK5Q00535 292 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 EML3Q32P44 896 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 FAM183BPQ6ZVS7 135 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 TMEM86AQ8N2M4 240 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 OR8U1Q8NH10 309 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 OR56A3Q8NH54 315 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 TRIB2Q92519 343 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 BIRC7Q96CA5 298 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 SLC25A44Q96H78 314 aaPredicted RBP5.9□□□□□ -1.47
VCAN-203ENST00000343200 EBF4Q9BQW3 602 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 CHRDQ9H2X0 955 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 CCM2LQ9NUG4 571 aaPredicted RBP5.9□□□□□ -1.47
VCAN-203ENST00000343200 TERTO14746 1132 aaKnown RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 ADH1BP00325 375 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 EGFP01133 1207 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 ARAFP10398 606 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 SLC11A1P49279 550 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 HADHBP55084 474 aaKnown RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 SRPXP78539 464 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 PTP4A2Q12974 167 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 CEBPEQ15744 281 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 GPRC5AQ8NFJ5 357 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 ADAP2Q9NPF8 381 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 TAS2R14Q9NYV8 317 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 ADAM29Q9UKF5 820 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 PIK3C2AO00443 1686 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 FAM166BA8MTA8 275 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 GAPDHSO14556 408 aaPredicted RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 NME1P15531 152 aaKnown RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 SSTR4P31391 388 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 PRSS3P35030 304 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 MAT1AQ00266 395 aaKnown RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 ARL6IP1Q15041 203 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 PARP15Q460N3 678 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 RHBDF2Q6PJF5 856 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms