RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 TERTO14746 1132 aaKnown RBP16.86■□□□□ 0.29
SMAD4-201ENST00000342988 SCGB1C2P0DMR2 95 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 ACY1Q03154 408 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 HMGB4Q8WW32 186 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 PUS1Q9Y606 427 aaKnown RBP eCLIP16.86■□□□□ 0.29
SMAD4-201ENST00000342988 SLIT1O75093 1534 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 AKAIN1P0CW23 69 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 TMEM225BP0DP42 221 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 PRSS3P35030 304 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 DUSP3P51452 185 aaPredicted RBP16.86■□□□□ 0.29
SMAD4-201ENST00000342988 CLCN2P51788 898 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 ZNF791Q3KP31 576 aaPredicted RBP16.86■□□□□ 0.29
SMAD4-201ENST00000342988 FITM2Q8N6M3 262 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 CCM2LQ9NUG4 571 aaPredicted RBP16.86■□□□□ 0.29
SMAD4-201ENST00000342988 UFSP2Q9NUQ7 469 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 FAM96BQ9Y3D0 163 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 ZCCHC11Q5TAX3 1644 aaKnown RBP16.86■□□□□ 0.29
SMAD4-201ENST00000342988 DFFBO76075 338 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 MAS1P04201 325 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 GTF2BQ00403 316 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 KLF1Q13351 362 aaPredicted RBP16.86■□□□□ 0.29
SMAD4-201ENST00000342988 ZNF461Q8TAF7 563 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 ZBTB45Q96K62 511 aaPredicted RBP16.86■□□□□ 0.29
SMAD4-201ENST00000342988 B3GNT3Q9Y2A9 372 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 GRXCR1A8MXD5 290 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 MSTNO14793 375 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 MSI1O43347 362 aaKnown RBP16.85■□□□□ 0.29
SMAD4-201ENST00000342988 ADGRF1Q5T601 910 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 ZNF704Q6ZNC4 412 aaPredicted RBP16.85■□□□□ 0.29
SMAD4-201ENST00000342988 OTOP3Q7RTS5 596 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 BBS10Q8TAM1 723 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 FBXW5Q969U6 566 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 METTL2AQ96IZ6 378 aaKnown RBP16.85■□□□□ 0.29
SMAD4-201ENST00000342988 NOL4LQ96MY1 436 aaPredicted RBP16.85■□□□□ 0.29
SMAD4-201ENST00000342988 NICN1Q9BSH3 213 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 PDE7BQ9NP56 450 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 CHRM1P11229 460 aaPredicted RBP16.85■□□□□ 0.29
SMAD4-201ENST00000342988 FAM214AQ32MH5 1076 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 C22orf42Q6IC83 251 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 VWA5B2Q8N398 1253 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 MS4A15Q8N5U1 240 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 ISYNA1Q9NPH2 558 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 CBY3A6NI87 242 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 CSTAP01040 98 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 CNN3Q15417 329 aaKnown RBP16.85■□□□□ 0.29
SMAD4-201ENST00000342988 NMNAT2Q9BZQ4 307 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 SOX17Q9H6I2 414 aaPredicted RBP16.85■□□□□ 0.29
SMAD4-201ENST00000342988 NFYAP23511 347 aaPredicted RBP16.85■□□□□ 0.29
SMAD4-201ENST00000342988 HK3P52790 923 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 PTTG1IPP53801 180 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 ABHD18Q0P651 414 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 CDKN2AIPNLQ96HQ2 116 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 ACTL7AQ9Y615 435 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 CD8B2A6NJW9 211 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 PIAS1O75925 651 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 STAG3L2P0CL84 134 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 CD8BP10966 210 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 NMBRP28336 390 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 GABARAPL2P60520 117 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 CTSL3PQ5NE16 218 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 C9orf131Q5VYM1 1079 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 GDPD4Q6W3E5 623 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 RELTQ969Z4 430 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 TRMT2BQ96GJ1 504 aaKnown RBP16.85■□□□□ 0.29
SMAD4-201ENST00000342988 ALPIP09923 528 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 NUDT1P36639 197 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 UBE2NLQ5JXB2 153 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 OR5D14Q8NGL3 314 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 OR5AK2Q8NH90 309 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 MAP3K3Q99759 626 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 POU3F4P49335 361 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 RPL11P62913 178 aaKnown RBP16.85■□□□□ 0.29
SMAD4-201ENST00000342988 GPR176Q14439 515 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 Q1RN00 199 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 ZFAND2BQ8WV99 257 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 CWH43Q9H720 699 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 IL21RQ9HBE5 538 aa16.85■□□□□ 0.29
SMAD4-201ENST00000342988 NCBP2LA6PVI3 153 aaKnown RBP16.84■□□□□ 0.29
SMAD4-201ENST00000342988 FAM227AF5H4B4 570 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 H7BYZ3 331 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 ADH1BP00325 375 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 NWD1Q149M9 1564 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 SYT7O43581 403 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 IL32P24001 234 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 BEX3Q00994 111 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 TGFBIQ15582 683 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 TRIB1Q96RU8 372 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 CACNG6Q9BXT2 260 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 NGBQ9NPG2 151 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 ROBO3Q96MS0 1386 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 PRDX3P30048 256 aaKnown RBP16.84■□□□□ 0.29
SMAD4-201ENST00000342988 ADRA1BP35368 520 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 TOB1P50616 345 aaPredicted RBP16.84■□□□□ 0.29
SMAD4-201ENST00000342988 ENPP6Q6UWR7 440 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 CXCL17Q6UXB2 119 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.84■□□□□ 0.29
SMAD4-201ENST00000342988 MRPL21Q7Z2W9 205 aaKnown RBP16.84■□□□□ 0.29
SMAD4-201ENST00000342988 LDB1Q86U70 411 aaPredicted RBP16.84■□□□□ 0.29
SMAD4-201ENST00000342988 TPPP3Q9BW30 176 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 A8MU76 341 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms