RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 C5orf34Q96MH7 638 aa12.19□□□□□ -0.46
TUBD1-202ENST00000340993 VSTM2LQ96N03 204 aa12.19□□□□□ -0.46
TUBD1-202ENST00000340993 EPN3Q9H201 632 aa12.19□□□□□ -0.46
TUBD1-202ENST00000340993 ACSS1Q9NUB1 689 aaPredicted RBP12.19□□□□□ -0.46
TUBD1-202ENST00000340993 PRODH2Q9UF12 536 aa12.19□□□□□ -0.46
TUBD1-202ENST00000340993 C19orf53Q9UNZ5 99 aaPredicted RBP12.19□□□□□ -0.46
TUBD1-202ENST00000340993 NCKAP5O14513 1909 aa12.19□□□□□ -0.46
TUBD1-202ENST00000340993 TRAV17A0A0B4J275 112 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 RNF103-CHMP3A0A140T963 221 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 GXYLT2A0PJZ3 443 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 C2orf72A6NCS6 295 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 EMC8O43402 210 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 COQ9O75208 318 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 CCL3P10147 92 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 DDX5P17844 614 aaKnown RBP12.18□□□□□ -0.46
TUBD1-202ENST00000340993 ABCD3P28288 659 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 GABRA3P34903 492 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 FRKP42685 505 aaPredicted RBP12.18□□□□□ -0.46
TUBD1-202ENST00000340993 HLCSP50747 726 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 GTDC1Q4AE62 458 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 VPS26BQ4G0F5 336 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 C6orf10Q5SRN2 563 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 SLC2A7Q6PXP3 512 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 IGFL3Q6UXB1 125 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 Q6ZS92 163 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.18□□□□□ -0.46
TUBD1-202ENST00000340993 CPSF7Q8N684 471 aaKnown RBP12.18□□□□□ -0.46
TUBD1-202ENST00000340993 ZNF441Q8N8Z8 693 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 C7orf57Q8NEG2 295 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 OR5D16Q8NGK9 328 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 OR8K3Q8NH51 312 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 OR5P2Q8WZ92 322 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 PNPLA2Q96AD5 504 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 TMEM125Q96AQ2 219 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 TESCQ96BS2 214 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 OMA1Q96E52 524 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 RMND5BQ96G75 393 aaPredicted RBP12.18□□□□□ -0.46
TUBD1-202ENST00000340993 LCORQ96JN0 433 aaPredicted RBP12.18□□□□□ -0.46
TUBD1-202ENST00000340993 JSRP1Q96MG2 331 aaPredicted RBP12.18□□□□□ -0.46
TUBD1-202ENST00000340993 SDR39U1Q9NRG7 319 aaPredicted RBP12.18□□□□□ -0.46
TUBD1-202ENST00000340993 PCDHGB4Q9UN71 923 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 PCDHGB7Q9Y5F8 929 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 SLC28A2O43868 658 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 REM1O75628 298 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 HMGN2P05204 90 aaKnown RBP12.18□□□□□ -0.46
TUBD1-202ENST00000340993 CD46P15529 392 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 CHI3L1P36222 383 aaPredicted RBP12.18□□□□□ -0.46
TUBD1-202ENST00000340993 PIGAP37287 484 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 ZFP36L2P47974 494 aaKnown RBP12.18□□□□□ -0.46
TUBD1-202ENST00000340993 NRG3P56975 720 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 SQLEQ14534 574 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 CCNJQ5T5M9 372 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 ZNF621Q6ZSS3 439 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 OLIG3Q7RTU3 272 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 TAGAPQ8N103 731 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 MDS2Q8NDY4 140 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 OR8J2Q8NGG1 315 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 GPR151Q8TDV0 419 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 SPACA9Q96E40 222 aaPredicted RBP12.18□□□□□ -0.46
TUBD1-202ENST00000340993 PANX1Q96RD7 426 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 C3orf14Q9HBI5 128 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 SLC6A13Q9NSD5 602 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 ZIM2Q9NZV7 527 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 ARMCX1Q9P291 453 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 NPFFR2Q9Y5X5 522 aa12.18□□□□□ -0.46
TUBD1-202ENST00000340993 SHANK1Q9Y566 2161 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 ZNF407Q9C0G0 2248 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 MED12Q93074 2177 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 PLOD2O00469 737 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 RNASET2O00584 256 aaKnown RBP12.17□□□□□ -0.46
TUBD1-202ENST00000340993 ZNHIT1O43257 154 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 SCN2BO60939 215 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 BCAS2O75934 225 aaPredicted RBP12.17□□□□□ -0.46
TUBD1-202ENST00000340993 SP1P08047 785 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 CT45A8P0DMV1 189 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 CT45A9P0DMV2 189 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 ACP2P11117 423 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 DNASE1L1P49184 302 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 KCNK10P57789 538 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 C21orf58P58505 322 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 PRR5P85299 388 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 PSG6Q00889 435 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 ZNHIT3Q15649 155 aaPredicted RBP12.17□□□□□ -0.46
TUBD1-202ENST00000340993 IGFBP7Q16270 282 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 CT45A2Q5DJT8 189 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 TNFAIP8L2Q6P589 184 aaPredicted RBP12.17□□□□□ -0.46
TUBD1-202ENST00000340993 FIGNL1Q6PIW4 674 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 LYPD8Q6UX82 237 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 CAMKMTQ7Z624 323 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 CPLX4Q7Z7G2 160 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 FUNDC1Q8IVP5 155 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 SLC16A11Q8NCK7 471 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 PSD4Q8NDX1 1056 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 C10orf82Q8WW14 230 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 GIMAP5Q96F15 307 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 AURKBQ96GD4 344 aaPredicted RBP12.17□□□□□ -0.46
TUBD1-202ENST00000340993 ZNF764Q96H86 408 aaPredicted RBP12.17□□□□□ -0.46
TUBD1-202ENST00000340993 MS4A4EQ96PG1 132 aa12.17□□□□□ -0.46
TUBD1-202ENST00000340993 ADOQ96SZ5 270 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms