RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 CLDN8P56748 225 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 CCDC190Q86UF4 302 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 ZNF676Q8N7Q3 588 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 NKD1Q969G9 470 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 GLYATL1Q969I3 302 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 TCEAL4Q96EI5 215 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 C7orf50Q9BRJ6 194 aaKnown RBP15.28■□□□□ 0.04
NPHP3-201ENST00000337331 DOHHQ9BU89 302 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 C11orf84Q9BUA3 381 aaPredicted RBP15.28■□□□□ 0.04
NPHP3-201ENST00000337331 COMMD4Q9H0A8 199 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 SAP130Q9H0E3 1048 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 A0A1B0GVI7 797 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 SLC43A1O75387 559 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 PPM1BO75688 479 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 PTPN6P29350 595 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 EXOC3L2Q2M3D2 409 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 PLAG1Q6DJT9 500 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 LIPIQ6XZB0 460 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 ZSCAN1Q8NBB4 408 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 HMGCLL1Q8TB92 370 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 THAP6Q8TBB0 222 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 ISL2Q96A47 359 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 HEBP2Q9Y5Z4 205 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 A0A0U1RQS6 177 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 C2orf92A0A1B0GVN3 265 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 A0A1W2PQ45 241 aaPredicted RBP15.27■□□□□ 0.04
NPHP3-201ENST00000337331 A0A1W2PQY0 241 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 MYADML2A6NDP7 307 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 ZNF705EA8MWA4 302 aaPredicted RBP15.27■□□□□ 0.04
NPHP3-201ENST00000337331 H3BQ06 376 aaPredicted RBP15.27■□□□□ 0.04
NPHP3-201ENST00000337331 GFRA2O00451 464 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 CSF3P09919 207 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 GGT2P36268 569 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 MAGEA12P43365 314 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 EIF4HQ15056 248 aaKnown RBP15.27■□□□□ 0.04
NPHP3-201ENST00000337331 TIGD3Q6B0B8 471 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 LHFPL3Q86UP9 236 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 OR4E2Q8NGC2 313 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 IRF7Q92985 503 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 SLC38A3Q99624 504 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 BTBD2Q9BX70 525 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 TRIM2Q9C040 744 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 WDR45Q9Y484 360 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 BRWD1Q9NSI6 2320 aa15.27■□□□□ 0.04
NPHP3-201ENST00000337331 NUP98P52948 1817 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 A0A0X1KG70 313 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 OAZ2O95190 189 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 GIFP27352 417 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 TIA1P31483 386 aaKnown RBP eCLIP15.27■□□□□ 0.03
NPHP3-201ENST00000337331 MLLT1Q03111 559 aaPredicted RBP15.27■□□□□ 0.03
NPHP3-201ENST00000337331 XKR4Q5GH76 650 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 TOR1AIP1Q5JTV8 583 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 MTFR2Q6P444 385 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 GDPGP1Q6ZNW5 385 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 CHCHD4Q8N4Q1 142 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 CRB3Q9BUF7 120 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 MTG2Q9H4K7 406 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 RBM7Q9Y580 266 aaKnown RBP15.27■□□□□ 0.03
NPHP3-201ENST00000337331 LDOC1O95751 146 aaPredicted RBP15.27■□□□□ 0.03
NPHP3-201ENST00000337331 CLCN7P51798 805 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 UGT3A2Q3SY77 523 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 NCEH1Q6PIU2 408 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 ZNF471Q9BX82 626 aaPredicted RBP15.27■□□□□ 0.03
NPHP3-201ENST00000337331 MS4A7Q9GZW8 240 aaPredicted RBP15.27■□□□□ 0.03
NPHP3-201ENST00000337331 ZNF639Q9UID6 485 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 INSL6Q9Y581 213 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 FKBP7Q9Y680 259 aa15.27■□□□□ 0.03
NPHP3-201ENST00000337331 CD8B2A6NJW9 211 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 DSCR3O14972 297 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 PIP5K1CO60331 668 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 AOC2O75106 756 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 RCBTB2O95199 551 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 C1GALT1C1LP0DN25 315 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 CD8BP10966 210 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 ADAM8P78325 824 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 ZNF234Q14588 700 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 LETMD1Q6P1Q0 360 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 CNKSR3Q6P9H4 555 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 ZNF783Q6ZMS7 281 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 TSPAN33Q86UF1 283 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 OR9Q2Q8NGE9 314 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 OVCA2Q8WZ82 227 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 OR4K3Q96R72 315 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 PKMYT1Q99640 499 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 DPYSL5Q9BPU6 564 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 PCDHGB7Q9Y5F8 929 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 J3QLW9 94 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 SERPINA3P01011 423 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 ZNF19P17023 458 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 JUNDP17535 347 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 AFF1P51825 1210 aaKnown RBP15.26■□□□□ 0.03
NPHP3-201ENST00000337331 PSPHP78330 225 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 DEFA6Q01524 100 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 KCNC3Q14003 757 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 NEK7Q8TDX7 302 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 CD180Q99467 661 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 OR10A4Q9H209 315 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 NT5DC2Q9H857 520 aa15.26■□□□□ 0.03
NPHP3-201ENST00000337331 ZNF334Q9HCZ1 680 aaPredicted RBP15.26■□□□□ 0.03
NPHP3-201ENST00000337331 STOX2Q9P2F5 926 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms