RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 LILRB4Q8NHJ6 448 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 FGF11Q92914 225 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 RSPRY1Q96DX4 576 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 AMDHD1Q96NU7 426 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 DEPDC7Q96QD5 511 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 TRMT61BQ9BVS5 477 aaKnown RBP11.6□□□□□ -0.55
VPS33B-201ENST00000333371 RHBGQ9H310 441 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 DPEP2Q9H4A9 486 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 GRIP1Q9Y3R0 1128 aa11.6□□□□□ -0.55
VPS33B-201ENST00000333371 A0A087WUU8 490 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 A0A1W2PRQ8 180 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 SHISA3A0PJX4 238 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 CPSF4LA6NMK7 179 aaKnown RBP11.59□□□□□ -0.55
VPS33B-201ENST00000333371 PRNPP04156 253 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 MYL12AP19105 171 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 WNT4P56705 351 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 GPM6BQ13491 265 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 SNAP47Q5SQN1 464 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 C9orf64Q5T6V5 341 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 NANOGNBQ7Z5D8 188 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 AMZ2Q86W34 360 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 NUDT13Q86X67 352 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 DCUN1D3Q8IWE4 304 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 CCDC116Q8IYX3 515 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 DTX3Q8N9I9 347 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 ASCC1Q8N9N2 400 aaKnown RBP11.59□□□□□ -0.55
VPS33B-201ENST00000333371 FAM46AQ96IP4 442 aaKnown RBP11.59□□□□□ -0.55
VPS33B-201ENST00000333371 MSLNLQ96KJ4 702 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 HDHD5Q9BXW7 423 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 SAP130Q9H0E3 1048 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 ZSCAN32Q9NX65 697 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 NPAP1Q9NZP6 1156 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 SF3B6Q9Y3B4 125 aaKnown RBP11.59□□□□□ -0.55
VPS33B-201ENST00000333371 SLC35F4A4IF30 521 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 CCDC182A6NF36 153 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 GRXCR1A8MXD5 290 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 NFATC1O95644 943 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 HMGN2P05204 90 aaKnown RBP11.59□□□□□ -0.55
VPS33B-201ENST00000333371 CA3P07451 260 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 DDOSTP39656 456 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 FRKP42685 505 aaPredicted RBP11.59□□□□□ -0.55
VPS33B-201ENST00000333371 SSR2P43308 183 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 MAN2A2P49641 1150 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 CCR8P51685 355 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 CLCNKAP51800 687 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 CDK5Q00535 292 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 ALDH6A1Q02252 535 aaKnown RBP11.59□□□□□ -0.55
VPS33B-201ENST00000333371 GPAT3Q53EU6 434 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 SLC30A6Q6NXT4 461 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 ADGRD2Q7Z7M1 963 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 HCAR2Q8TDS4 363 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 SLC7A6Q92536 515 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 KCTD7Q96MP8 289 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 MENTQ9BUN1 341 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 TMED9Q9BVK6 235 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 TBC1D17Q9HA65 648 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 DEC1Q9P2X7 70 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 SNX7Q9UNH6 387 aa11.59□□□□□ -0.55
VPS33B-201ENST00000333371 IGKV1-8A0A0C4DH67 115 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 POLR1CO15160 346 aaPredicted RBP11.58□□□□□ -0.56
VPS33B-201ENST00000333371 HPGDSO60760 199 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 IL1AP01583 271 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 LIMS3P0CW19 117 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 LIMS4P0CW20 117 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 MYL9P24844 172 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 SLC9A3P48764 834 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 EFNB1P98172 346 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 CDK10Q15131 360 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 TCEA2Q15560 299 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 TMEM107Q6UX40 140 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 VRK2Q86Y07 508 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 BBS1Q8NFJ9 593 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 OR8K5Q8NH50 307 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 OR8D1Q8WZ84 308 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 LINC00615Q96LM1 132 aaPredicted RBP11.58□□□□□ -0.56
VPS33B-201ENST00000333371 MCOLN1Q9GZU1 580 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 SLC22A4Q9H015 551 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 SYNPO2LQ9H987 977 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 SLC27A6Q9Y2P4 619 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 CLCA3PQ9Y6N3 262 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 C17orf113A0A1B0GUU1 675 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 C2orf92A0A1B0GVN3 265 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 SLC2A10O95528 541 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 NR2F6P10588 404 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 ASAH1Q13510 395 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 NDUFA5Q16718 116 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 ZNF791Q3KP31 576 aaPredicted RBP11.58□□□□□ -0.56
VPS33B-201ENST00000333371 FAM78AQ5JUQ0 283 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 DDI2Q5TDH0 399 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 KIAA1161Q6NSJ0 714 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 C1orf94Q6P1W5 598 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 FAM92BQ6ZTR7 304 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 DGLUCYQ7Z3D6 616 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 OR5K2Q8NHB8 316 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 ZFPM2Q8WW38 1151 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 RGMAQ96B86 450 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 RNF170Q96K19 258 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 SNX18Q96RF0 628 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 OSGEPL1Q9H4B0 414 aa11.58□□□□□ -0.56
VPS33B-201ENST00000333371 CERS4Q9HA82 394 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms