RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 MED9Q9NWA0 146 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 ASB6Q9NWX5 421 aa12.06□□□□□ -0.48
CCDC60-201ENST00000327554 RFXAPO00287 272 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 KLHL18O94889 574 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 SOX30O94993 753 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 BCHEP06276 602 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 SRPRAP08240 638 aaKnown RBP12.05□□□□□ -0.48
CCDC60-201ENST00000327554 EPHA4P54764 986 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 SEMG2Q02383 582 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 OPCMLQ14982 345 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 HACD4Q5VWC8 232 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 HBMQ6B0K9 141 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 SEZ6L2Q6UXD5 910 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 WASH2PQ6VEQ5 465 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 FGD2Q7Z6J4 655 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 CXorf58Q96LI9 332 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 ERMAPQ96PL5 475 aaPredicted RBP12.05□□□□□ -0.48
CCDC60-201ENST00000327554 ZNF436Q9C0F3 470 aaPredicted RBP12.05□□□□□ -0.48
CCDC60-201ENST00000327554 BRD7Q9NPI1 651 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 GLS2Q9UI32 602 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 ACSL5Q9ULC5 683 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 A4GNTQ9UNA3 340 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 NOD1Q9Y239 953 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 ANAPC1Q9H1A4 1944 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 A8MXK9 166 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 K7ERQ8 282 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 MMP20O60882 483 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 NFATC1O95644 943 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 PROS1P07225 676 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 LCN1P31025 176 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 GKP32189 559 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 CCR6P51684 374 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 AP1S1P61966 158 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 RPS26P62854 115 aaKnown RBP12.05□□□□□ -0.48
CCDC60-201ENST00000327554 ACSM1Q08AH1 577 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 PIN1Q13526 163 aaPredicted RBP12.05□□□□□ -0.48
CCDC60-201ENST00000327554 HORMAD2Q8N7B1 307 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 SAMD12Q8N8I0 201 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 ANKRD53Q8N9V6 530 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 TMEM19Q96HH6 336 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 SLC38A2Q96QD8 506 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 SECISBP2Q96T21 854 aaKnown RBP12.05□□□□□ -0.48
CCDC60-201ENST00000327554 CACNG6Q9BXT2 260 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 WASH6PQ9NQA3 447 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 ZFR2Q9UPR6 939 aaKnown RBP12.05□□□□□ -0.48
CCDC60-201ENST00000327554 TMEM5Q9Y2B1 443 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 ZNF175Q9Y473 711 aa12.05□□□□□ -0.48
CCDC60-201ENST00000327554 IGLV3-16A0A075B6K0 115 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 A0A0U1RQF3 1178 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 A0A1W2PRB8 838 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 KDM4EB2RXH2 506 aaPredicted RBP12.04□□□□□ -0.48
CCDC60-201ENST00000327554 KRBOX1C9JBD0 128 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 GJB5O95377 273 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 H2AFB2P0C5Z0 115 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 HOXB3P14651 431 aaPredicted RBP12.04□□□□□ -0.48
CCDC60-201ENST00000327554 UGT2B7P16662 529 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 NPR2P20594 1047 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 CD52P31358 61 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 MTNR1BP49286 362 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 RAG2P55895 527 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 FZD5Q13467 585 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 ZNF791Q3KP31 576 aaPredicted RBP12.04□□□□□ -0.48
CCDC60-201ENST00000327554 SERPINA13PQ6UXR4 307 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 COMMD6Q7Z4G1 85 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 ZNF280BQ86YH2 543 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 SIAH3Q8IW03 269 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 POGLUT1Q8NBL1 392 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 OR4F15Q8NGB8 312 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 OR4K5Q8NGD3 323 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 CLP1Q92989 425 aaKnown RBP12.04□□□□□ -0.48
CCDC60-201ENST00000327554 SCRN2Q96FV2 425 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 SFXN2Q96NB2 322 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 METTL17Q9H7H0 456 aaPredicted RBP12.04□□□□□ -0.48
CCDC60-201ENST00000327554 CXorf36Q9H7Y0 433 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 NLGN3Q9NZ94 848 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 ATPIF1Q9UII2 106 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 PADI3Q9ULW8 664 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 C5orf58C9J3I9 102 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 ZNF593O00488 134 aaPredicted RBP12.04□□□□□ -0.48
CCDC60-201ENST00000327554 SSNA1O43805 119 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 EFCAB14O75071 495 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 WDPCPO95876 746 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 HPXP02790 462 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 NMBP08949 121 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 ACSL1P33121 698 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 KCNJ5P48544 419 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 SMIM11AP58511 58 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 NAE1Q13564 534 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 NDUFA9Q16795 377 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 FAM71E1Q6IPT2 247 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 RFLNAQ6ZTI6 216 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 MRGPREQ86SM8 312 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 COMTD1Q86VU5 262 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 LRRC56Q8IYG6 542 aaPredicted RBP12.04□□□□□ -0.48
CCDC60-201ENST00000327554 WDR48Q8TAF3 677 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 C16orf78Q8WTQ4 265 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 MRPS31Q92665 395 aaKnown RBP12.04□□□□□ -0.48
CCDC60-201ENST00000327554 YIPF5Q969M3 257 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 SIPA1Q96FS4 1042 aa12.04□□□□□ -0.48
CCDC60-201ENST00000327554 ZNF354BQ96LW1 612 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms