RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 COLEC12Q5KU26 742 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 SLC23A3Q6PIS1 610 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 GATAD2AQ86YP4 633 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 VWA5B2Q8N398 1253 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 ATG16L2Q8NAA4 619 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 OR51Q1Q8NH59 317 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 RBM18Q96H35 190 aaKnown RBP16.66■□□□□ 0.26
RAB39A-201ENST00000320578 NECAB3Q96P71 396 aaPredicted RBP16.66■□□□□ 0.26
RAB39A-201ENST00000320578 GRIP2Q9C0E4 1043 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 SAP130Q9H0E3 1048 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 GAREM1Q9H706 876 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 CLDN16Q9Y5I7 305 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 TRIM64CA6NLI5 447 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 TTC36A6NLP5 189 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 SIGLEC6O43699 453 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 GADD45GO95257 159 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 S1PR1P21453 382 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 STT3AP46977 705 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 CDH12P55289 794 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 CHRNEQ04844 493 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 SLC13A2Q13183 592 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 DUSP5Q16690 384 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 ANKRD34AQ69YU3 496 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 GALNT12Q8IXK2 581 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 GPR135Q8IZ08 494 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 SHISA5Q8N114 240 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 ZBTB44Q8NCP5 570 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 OR10G2Q8NGC3 310 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 GABARAPL3Q9BY60 117 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 FAM192AQ9GZU8 254 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 SOX17Q9H6I2 414 aaPredicted RBP16.66■□□□□ 0.26
RAB39A-201ENST00000320578 FANCEQ9HB96 536 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 KRT84Q9NSB2 600 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 TMEM9Q9P0T7 183 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 KIF17Q9P2E2 1029 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 GMEB2Q9UKD1 530 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 HCN4Q9Y3Q4 1203 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 FFAR1O14842 300 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 OXSR1O95747 527 aaPredicted RBP16.65■□□□□ 0.26
RAB39A-201ENST00000320578 CBX7O95931 251 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 CLPTM1O96005 669 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 CFIP05156 583 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 PIGAP37287 484 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 RPL5P46777 297 aaKnown RBP16.65■□□□□ 0.26
RAB39A-201ENST00000320578 SEPHS1P49903 392 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 KCNAB1Q14722 419 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 EXOC3L2Q2M3D2 409 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 CYP27C1Q4G0S4 372 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 ZNF691Q5VV52 312 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 FRRS1Q6ZNA5 592 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 SETD9Q8NE22 299 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 TSPAN14Q8NG11 270 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 OR4D9Q8NGE8 314 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 OR1L3Q8NH93 324 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 PHF10Q8WUB8 498 aaKnown RBP16.65■□□□□ 0.26
RAB39A-201ENST00000320578 FBLIM1Q8WUP2 373 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 SLC9A6Q92581 669 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 CDS1Q92903 461 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 OTUB1Q96FW1 271 aaPredicted RBP16.65■□□□□ 0.26
RAB39A-201ENST00000320578 SDF2Q99470 211 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 ARHGDIGQ99819 225 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 LMF2Q9BU23 707 aaKnown RBP16.65■□□□□ 0.26
RAB39A-201ENST00000320578 ALOXE3Q9BYJ1 711 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 ZNF350Q9GZX5 532 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 ADAP2Q9NPF8 381 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 ENOPH1Q9UHY7 261 aa16.65■□□□□ 0.26
RAB39A-201ENST00000320578 SYNDIG1LA6NDD5 238 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 J3KTA2 159 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 NKX2-2O95096 273 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 CPNE6O95741 557 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 CLIC3O95833 236 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 THBS1P07996 1170 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 SYPP08247 313 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 CT62P0C5K7 136 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 FOLR1P15328 257 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 MAT1AQ00266 395 aaKnown RBP16.64■□□□□ 0.25
RAB39A-201ENST00000320578 DUSP8Q13202 625 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 LAPTM4AQ15012 233 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 ZNF311Q5JNZ3 666 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 ARHGAP22Q7Z5H3 698 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 RIT1Q92963 219 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 ZNF501Q96CX3 271 aaPredicted RBP16.64■□□□□ 0.25
RAB39A-201ENST00000320578 DGAT2Q96PD7 388 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 PITX2Q99697 317 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 NUDT22Q9BRQ3 303 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 NDC1Q9BTX1 674 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 EVA1AQ9H8M9 152 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 NMNAT1Q9HAN9 279 aaPredicted RBP16.64■□□□□ 0.25
RAB39A-201ENST00000320578 NDUFA13Q9P0J0 144 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 POFUT2Q9Y2G5 429 aa16.64■□□□□ 0.25
RAB39A-201ENST00000320578 TMEM184BQ9Y519 407 aaPredicted RBP16.64■□□□□ 0.25
RAB39A-201ENST00000320578 ARID1BQ8NFD5 2236 aaPredicted RBP16.64■□□□□ 0.25
RAB39A-201ENST00000320578 ARHGAP33O14559 1287 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 DSCR3O14972 297 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 MITFO75030 526 aaPredicted RBP16.63■□□□□ 0.25
RAB39A-201ENST00000320578 CCNB2O95067 398 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 EPPINO95925 133 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 MYF5P13349 255 aa16.63■□□□□ 0.25
RAB39A-201ENST00000320578 YAP1P46937 504 aaKnown RBP16.63■□□□□ 0.25
RAB39A-201ENST00000320578 PDX1P52945 283 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms