RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 VN1R3Q9BXE9 311 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 TEX10Q9NXF1 929 aaPredicted RBP8.5□□□□□ -1.05
CTC1-201ENST00000315684 E7ENX8 843 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 WRBO00258 174 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 MT-ND5P03915 603 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 TACSTD2P09758 323 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 RAP2AP10114 183 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 RPS9P46781 194 aaKnown RBP8.5□□□□□ -1.05
CTC1-201ENST00000315684 POU3F4P49335 361 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 FOXA1P55317 472 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 RBM39Q14498 530 aaKnown RBP8.5□□□□□ -1.05
CTC1-201ENST00000315684 RUNDC3AQ59EK9 446 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 LINGO2Q7L985 606 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 PQLC1Q8N2U9 271 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 GAL3ST3Q96A11 431 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 ACTRT3Q9BYD9 372 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 UCK2Q9BZX2 261 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 FN3KQ9H479 309 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 IRGMA1A4Y4 181 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 UBL4AP11441 157 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 COL9A1P20849 921 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 AOAHP28039 575 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 RAB25P57735 213 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 CCSAPQ6IQ19 270 aaPredicted RBP8.5□□□□□ -1.05
CTC1-201ENST00000315684 SYNPOQ8N3V7 929 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 DDHD1Q8NEL9 900 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 OR52E2Q8NGJ4 325 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 C11orf24Q96F05 449 aaPredicted RBP8.5□□□□□ -1.05
CTC1-201ENST00000315684 KLHL13Q9P2N7 655 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 ING4Q9UNL4 249 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 PCDHGB7Q9Y5F8 929 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 ZNF638Q14966 1978 aaKnown RBP8.5□□□□□ -1.05
CTC1-201ENST00000315684 MKRN2OSH3BPM6 223 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 RGS10O43665 173 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 RFPL1O75677 317 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 ZNF846Q147U1 533 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 IQCCQ4KMZ1 466 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 C18orf63Q68DL7 685 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 LEG1Q6P5S2 330 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 ISCA2Q86U28 154 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 TMEM135Q86UB9 458 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 TANKQ92844 425 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 ECHDC3Q96DC8 303 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 S100A14Q9HCY8 104 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 C14orf105Q9NVL8 296 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 DNAJB11Q9UBS4 358 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 SERGEFQ9UGK8 458 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 RGPD4Q7Z3J3 1758 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 PIAS2O75928 621 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 ZXDAP98168 799 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 GAS6Q14393 721 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 TMEM176BQ3YBM2 270 aaPredicted RBP8.5□□□□□ -1.05
CTC1-201ENST00000315684 PRAMEF17Q5VTA0 474 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 ADAMTSL4Q6UY14 1074 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 C1orf21Q9H246 121 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 IGSF5Q9NSI5 407 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 SATB2Q9UPW6 733 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 KNL1Q8NG31 2342 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 CD63P08962 238 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 ATXN1LP0C7T5 689 aaKnown RBP8.5□□□□□ -1.05
CTC1-201ENST00000315684 NR2C1P13056 603 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 CTXN1P60606 82 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 MRPL58Q14197 206 aaKnown RBP8.5□□□□□ -1.05
CTC1-201ENST00000315684 TRAM2Q15035 370 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 CBARPQ8N350 705 aaPredicted RBP8.5□□□□□ -1.05
CTC1-201ENST00000315684 GALNT15Q8N3T1 639 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 OR5M9Q8NGP3 310 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 OR2L8Q8NGY9 312 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 PSMA8Q8TAA3 256 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 ZFPM2Q8WW38 1151 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 SEC14L1Q92503 715 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 ZFP3Q96NJ6 502 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 ENKD1Q9H0I2 346 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 MED11Q9P086 117 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 PLXNB2O15031 1838 aa8.5□□□□□ -1.05
CTC1-201ENST00000315684 OR2W5A6NFC9 320 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 METTL12A8MUP2 240 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 CLPXO76031 633 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 CPMP14384 443 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 PIK3CBP42338 1070 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 SMSP52788 366 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 SF3B4Q15427 424 aaKnown RBP eCLIP8.49□□□□□ -1.056e-7■■■■■ 26.8
CTC1-201ENST00000315684 ATG9BQ674R7 924 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 CCDC80Q76M96 950 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 ZNF687Q8N1G0 1237 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 TMEM178AQ8NBL3 297 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 OR4K13Q8NH42 304 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 TRIB1Q96RU8 372 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 INTS6Q9UL03 887 aaKnown RBP8.49□□□□□ -1.05
CTC1-201ENST00000315684 NENFQ9UMX5 172 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 NME7Q9Y5B8 376 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 PRAMEF10O60809 474 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 LCATP04180 440 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 CSNK1DP48730 415 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 CYB561P49447 251 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 GSK3BP49841 420 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 TMEM52BQ4KMG9 183 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 HDDC2Q7Z4H3 204 aa8.49□□□□□ -1.05
CTC1-201ENST00000315684 YRDCQ86U90 279 aaKnown RBP8.49□□□□□ -1.05
CTC1-201ENST00000315684 LAPTM4BQ86VI4 370 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms