RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 OR10H1Q9Y4A9 318 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 ZNF638Q14966 1978 aaKnown RBP5.68□□□□□ -1.5
SEC22A-201ENST00000309934 TCRBV3S1A0A5B6 114 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 JRKO75564 520 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 CCNB2O95067 398 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 CDK1P06493 297 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 FABP1P07148 127 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 IL3P08700 152 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 CD247P20963 164 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 HIST1H1TP22492 207 aaPredicted RBP5.68□□□□□ -1.5
SEC22A-201ENST00000309934 CAPGP40121 348 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 MAGEA2P43356 314 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 HTR6P50406 440 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 CDK9P50750 372 aaKnown RBP5.68□□□□□ -1.5
SEC22A-201ENST00000309934 NRG3P56975 720 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 RAB38P57729 211 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 GALK2Q01415 458 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 ZNF155Q12901 538 aaPredicted RBP5.68□□□□□ -1.5
SEC22A-201ENST00000309934 MTAPQ13126 283 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 SLAMF1Q13291 335 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 BCL2A1Q16548 175 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 C14orf28Q4W4Y0 310 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 CCDC157Q569K6 752 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 CATSPEREQ5SY80 951 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 NDUFAF5Q5TEU4 345 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 BROXQ5VW32 411 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 LPCAT4Q643R3 524 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 SUSD1Q6UWL2 747 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 Q6ZSR9 355 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 SSX6Q7RTT6 188 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 ZNF550Q7Z398 422 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 SLC22A16Q86VW1 577 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 CLHC1Q8NHS4 586 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 DAZLQ92904 295 aaKnown RBP5.68□□□□□ -1.5
SEC22A-201ENST00000309934 GATA6Q92908 595 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 ZNF597Q96LX8 424 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 MS4A4EQ96PG1 132 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 DDX31Q9H8H2 851 aaKnown RBP5.68□□□□□ -1.5
SEC22A-201ENST00000309934 CXorf21Q9HAI6 301 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 BIN3Q9NQY0 253 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 PNO1Q9NRX1 252 aaKnown RBP5.68□□□□□ -1.5
SEC22A-201ENST00000309934 ABI3Q9P2A4 366 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 NXT1Q9UKK6 140 aaKnown RBP5.68□□□□□ -1.5
SEC22A-201ENST00000309934 FBXW2Q9UKT8 454 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 CNOT6Q9ULM6 557 aaKnown RBP5.68□□□□□ -1.5
SEC22A-201ENST00000309934 MGAT4BQ9UQ53 548 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 SLC22A7Q9Y694 548 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 CBY3A6NI87 242 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 TNFRSF11BO00300 401 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 UBFD1O14562 309 aaKnown RBP5.68□□□□□ -1.5
SEC22A-201ENST00000309934 LATO43561 262 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 SERPINA1P01009 418 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 RAB3AP20336 220 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 HOXA6P31267 233 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 CPOXP36551 454 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 SPANXN2Q5MJ10 180 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 DCST1Q5T197 706 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 MAVSQ7Z434 540 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 ZNF605Q86T29 641 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 COX18Q8N8Q8 333 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 EDAQ92838 391 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 TSACCQ96A04 125 aaPredicted RBP5.68□□□□□ -1.5
SEC22A-201ENST00000309934 BIRC7Q96CA5 298 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 FCRL1Q96LA6 429 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 CCNL2Q96S94 520 aaPredicted RBP5.68□□□□□ -1.5
SEC22A-201ENST00000309934 SEMA6AQ9H2E6 1030 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 TMEM38AQ9H6F2 299 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 SMURF2Q9HAU4 748 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 TIGARQ9NQ88 270 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 PADI2Q9Y2J8 665 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 PCDHA9Q9Y5H5 950 aa5.68□□□□□ -1.5
SEC22A-201ENST00000309934 OR5K3A6NET4 321 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 HMX3A6NHT5 357 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 LRRC14BA6NHZ5 514 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 PRR23D1E9PI22 279 aaPredicted RBP5.67□□□□□ -1.5
SEC22A-201ENST00000309934 GATCO43716 136 aaKnown RBP5.67□□□□□ -1.5
SEC22A-201ENST00000309934 KCNK5O95279 499 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 IFNGP01579 166 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 PDGFAP04085 211 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 KLK3P07288 261 aaPredicted RBP5.67□□□□□ -1.5
SEC22A-201ENST00000309934 PRR23D2P0DMB1 279 aaPredicted RBP5.67□□□□□ -1.5
SEC22A-201ENST00000309934 ERGP11308 486 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 NME1P15531 152 aaKnown RBP5.67□□□□□ -1.5
SEC22A-201ENST00000309934 CAPN3P20807 821 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 CSTF2P33240 577 aaKnown RBP eCLIP5.67□□□□□ -1.5
SEC22A-201ENST00000309934 ALDH3A2P51648 485 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 OR2B6P58173 313 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 CSNK1G2P78368 415 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 SPIBQ01892 262 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 MVKQ03426 396 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 ZNF311Q5JNZ3 666 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 ULK3Q6PHR2 472 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 THAP5Q7Z6K1 395 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 CDRT4Q8N9R6 151 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 C9orf43Q8TAL5 461 aaPredicted RBP5.67□□□□□ -1.5
SEC22A-201ENST00000309934 PIGXQ8TBF5 258 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 MAFIPQ8WZ33 124 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 OR1E3Q8WZA6 343 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 SNAPC3Q92966 411 aa5.67□□□□□ -1.5
SEC22A-201ENST00000309934 APIPQ96GX9 242 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms