RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 PPIL1Q9Y3C6 166 aa4.64□□□□□ -1.67
CAST-201ENST00000309190 HS3ST3A1Q9Y663 406 aa4.64□□□□□ -1.67
CAST-201ENST00000309190 CACNA1DQ01668 2161 aa4.64□□□□□ -1.67
CAST-201ENST00000309190 A0A1B0GTQ1 180 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 A0A1W2PR48 441 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 SLCO1B7G3V0H7 640 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 B3GALT2O43825 422 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 UGT2B11O75310 529 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 AP2A2O94973 939 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 BCHEP06276 602 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 SNRPB2P08579 225 aaKnown RBP4.63□□□□□ -1.67
CAST-201ENST00000309190 GKN3PP0CG01 181 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 GLB1P16278 677 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 ZNF12P17014 697 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 CD1CP29017 333 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 AGFG1P52594 562 aaKnown RBP4.63□□□□□ -1.67
CAST-201ENST00000309190 CRYBA2P53672 197 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 CDH15P55291 814 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 ALDH6A1Q02252 535 aaKnown RBP4.63□□□□□ -1.67
CAST-201ENST00000309190 RUNX2Q13950 521 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 SHBQ15464 509 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 CLPPQ16740 277 aaPredicted RBP4.63□□□□□ -1.67
CAST-201ENST00000309190 ZNF385BQ569K4 471 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 NIPAL1Q6NVV3 410 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 BLOC1S3Q6QNY0 202 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 IL20RBQ6UXL0 311 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.63□□□□□ -1.67
CAST-201ENST00000309190 VTCN1Q7Z7D3 282 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 PATL1Q86TB9 770 aaKnown RBP4.63□□□□□ -1.67
CAST-201ENST00000309190 NAXDQ8IW45 347 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 MSRB3Q8IXL7 192 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 C10orf111Q8N326 155 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 OR51Q1Q8NH59 317 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 GRHL3Q8TE85 626 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 VPS50Q96JG6 964 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 VPS35Q96QK1 796 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 ADOQ96SZ5 270 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 SDHCQ99643 169 aaPredicted RBP4.63□□□□□ -1.67
CAST-201ENST00000309190 DUSP26Q9BV47 211 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 SCNM1Q9BWG6 230 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 SEMA4CQ9C0C4 833 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 LRRN3Q9H3W5 708 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 PLGRKTQ9HBL7 147 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 AMBNQ9NP70 447 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 ACTR3BQ9P1U1 418 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 C3orf18Q9UK00 162 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 SNX7Q9UNH6 387 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 ERVK-11Q9UQG0 969 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 LOXL2Q9Y4K0 774 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 ZNF780BQ9Y6R6 833 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 LRRK1Q38SD2 2015 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 ATG2AQ2TAZ0 1938 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 A0A1W2PPV9 198 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 NKX2-8O15522 239 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 SLC28A2O43868 658 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 FGF17O60258 216 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 TRAPPC6AO75865 159 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 GABARAPO95166 117 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 CLIC3O95833 236 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 RPS17P08708 135 aaKnown RBP4.63□□□□□ -1.67
CAST-201ENST00000309190 FTH1P19P0C7X4 201 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 RANBP1P43487 201 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 BCAP31P51572 246 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 NR0B1P51843 470 aaKnown RBP4.63□□□□□ -1.67
CAST-201ENST00000309190 DCDC1P59894 354 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 HBA1P69905 142 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 GABREP78334 506 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 SRYQ05066 204 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 DUSP2Q05923 314 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 MERTKQ12866 999 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 ZNF155Q12901 538 aaPredicted RBP4.63□□□□□ -1.67
CAST-201ENST00000309190 FLOT2Q14254 428 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 SQLEQ14534 574 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 SPCS2Q15005 226 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 INAVAQ3KP66 663 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 AGAP7PQ5VUJ5 663 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 YOD1Q5VVQ6 348 aaPredicted RBP4.63□□□□□ -1.67
CAST-201ENST00000309190 DEF8Q6ZN54 512 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 PRSS48Q7RTY5 328 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 VN1R5Q7Z5H4 357 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 VN1R4Q7Z5H5 301 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 NLRP8Q86W28 1048 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 CALHM3Q86XJ0 350 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 CCDC71Q8IV32 467 aaPredicted RBP4.63□□□□□ -1.67
CAST-201ENST00000309190 HS3ST5Q8IZT8 346 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 METTL21AQ8WXB1 218 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 ZNF578Q96N58 590 aaPredicted RBP4.63□□□□□ -1.67
CAST-201ENST00000309190 SLIRPQ9GZT3 109 aaKnown RBP4.63□□□□□ -1.67
CAST-201ENST00000309190 CUTCQ9NTM9 273 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 FBXO34Q9NWN3 711 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 FAF1Q9UNN5 650 aaPredicted RBP4.63□□□□□ -1.67
CAST-201ENST00000309190 VDAC3Q9Y277 283 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 NTNG1Q9Y2I2 539 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 AP4S1Q9Y587 144 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 SPACA6W5XKT8 324 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 LRBAP50851 2863 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 IGLV3-16A0A075B6K0 115 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 RNF103-CHMP3A0A140T963 221 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 ARGFXA6NJG6 315 aa4.63□□□□□ -1.67
CAST-201ENST00000309190 SCN2BO60939 215 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms