RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 CLEC2DQ9UHP7 191 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 URB1O60287 2271 aaKnown RBP12.59□□□□□ -0.39
DDX54-201ENST00000306014 AHCYP23526 432 aa12.58□□□□□ -0.39
DDX54-201ENST00000306014 TAS2R43P59537 309 aa12.58□□□□□ -0.39
DDX54-201ENST00000306014 PFN3P60673 137 aa12.58□□□□□ -0.39
DDX54-201ENST00000306014 MGAT3Q09327 533 aa12.58□□□□□ -0.39
DDX54-201ENST00000306014 ZNF852Q6ZMS4 543 aa12.58□□□□□ -0.39
DDX54-201ENST00000306014 CHST4Q8NCG5 386 aa12.58□□□□□ -0.39
DDX54-201ENST00000306014 SNAPC3Q92966 411 aa12.58□□□□□ -0.39
DDX54-201ENST00000306014 ACTL8Q9H568 366 aa12.58□□□□□ -0.39
DDX54-201ENST00000306014 ZNF334Q9HCZ1 680 aaPredicted RBP12.58□□□□□ -0.39
DDX54-201ENST00000306014 TBC1D24Q9ULP9 559 aa12.58□□□□□ -0.39
DDX54-201ENST00000306014 AP1M2Q9Y6Q5 423 aa12.58□□□□□ -0.39
DDX54-201ENST00000306014 CLDN4O14493 209 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 HMGN2P05204 90 aaKnown RBP12.58□□□□□ -0.4
DDX54-201ENST00000306014 DRD2P14416 443 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 DRD5P21918 477 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 MLLT11Q13015 90 aaPredicted RBP12.58□□□□□ -0.4
DDX54-201ENST00000306014 MINDY4Q4G0A6 757 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 DEFB134Q4QY38 66 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 LACC1Q8IV20 430 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 SLC44A3Q8N4M1 653 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 SLC38A5Q8WUX1 472 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 AHCYL2Q96HN2 611 aaKnown RBP12.58□□□□□ -0.4
DDX54-201ENST00000306014 HYLS1Q96M11 299 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 CSF3RQ99062 836 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 SAP130Q9H0E3 1048 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 FOLH1BQ9HBA9 442 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 C12orf4Q9NQ89 552 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 MED11Q9P086 117 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 VEGFDO43915 354 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 C1orf105O95561 183 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 ERVK-21P61565 698 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 CD300CQ08708 224 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 OR4K14Q8NGD5 310 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 WBP2Q969T9 261 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 CREB3L1Q96BA8 519 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 SLC22A18Q96BI1 424 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 RNF31Q96EP0 1072 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 SAMD8Q96LT4 415 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 SLA2Q9H6Q3 261 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 THSD1Q9NS62 852 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 C1orf226A1L170 272 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 RGS9O75916 674 aaPredicted RBP12.58□□□□□ -0.4
DDX54-201ENST00000306014 IFNA6P05013 189 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 SOX2P48431 317 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 CSNK1DP48730 415 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 YBX1P67809 324 aaKnown RBP12.58□□□□□ -0.4
DDX54-201ENST00000306014 CAMK1Q14012 370 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 KLHDC8AQ8IYD2 350 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 TREX2Q9BQ50 279 aaPredicted RBP12.58□□□□□ -0.4
DDX54-201ENST00000306014 LGR4Q9BXB1 951 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 CPEB1Q9BZB8 566 aaKnown RBP12.58□□□□□ -0.4
DDX54-201ENST00000306014 HEBP2Q9Y5Z4 205 aa12.58□□□□□ -0.4
DDX54-201ENST00000306014 UNC119BA6NIH7 251 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 PRKYO43930 277 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 FGFBP1Q14512 234 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 MPP7Q5T2T1 576 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 LIPIQ6XZB0 460 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 ZNF782Q6ZMW2 699 aaPredicted RBP12.57□□□□□ -0.4
DDX54-201ENST00000306014 SYT14Q8NB59 555 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 CEP76Q8TAP6 659 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 MOAP1Q96BY2 351 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 GAL3ST4Q96RP7 486 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 RANBP3Q9H6Z4 567 aaPredicted RBP12.57□□□□□ -0.4
DDX54-201ENST00000306014 NUDT15Q9NV35 164 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 HCFC1R1Q9NWW0 138 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 TMEFF2Q9UIK5 374 aaPredicted RBP12.57□□□□□ -0.4
DDX54-201ENST00000306014 ACSL5Q9ULC5 683 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 ZNFX1Q9P2E3 1918 aaKnown RBP12.57□□□□□ -0.4
DDX54-201ENST00000306014 FAM183AA6NL82 134 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 ELOA3DA6NLF2 546 aaPredicted RBP12.57□□□□□ -0.4
DDX54-201ENST00000306014 IL1AP01583 271 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 CSN2P05814 226 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 LHCGRP22888 699 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 SLC19A1P41440 591 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 ELAVL3Q14576 367 aaKnown RBP12.57□□□□□ -0.4
DDX54-201ENST00000306014 GPR19Q15760 415 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 ELOA3BQ3SY89 546 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 CYHR1Q6ZMK1 362 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 NRROSQ86YC3 692 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 ELOA3Q8NG57 546 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 ADAD1Q96M93 576 aaKnown RBP12.57□□□□□ -0.4
DDX54-201ENST00000306014 S100A13Q99584 98 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 ELL3Q9HB65 397 aaPredicted RBP12.57□□□□□ -0.4
DDX54-201ENST00000306014 IGLON5A6NGN9 336 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 BLOC1S5-TXNDC5H3BN57 136 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 SMAD9O15198 467 aaKnown RBP12.57□□□□□ -0.4
DDX54-201ENST00000306014 IGLV3-27P01718 113 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 TIMP2P16035 220 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 SLC6A6P31641 620 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 RPS19P39019 145 aaKnown RBP12.57□□□□□ -0.4
DDX54-201ENST00000306014 PPP2R2DQ66LE6 453 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 RPTNQ6XPR3 784 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 SLCO4C1Q6ZQN7 724 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 GDPD3Q7L5L3 318 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 TAF8Q7Z7C8 310 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 PDZD3Q86UT5 571 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 SYNPOQ8N3V7 929 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 YIPF7Q8N8F6 280 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms