RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ATG13O75143 517 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 C6orf47O95873 294 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 RRASP10301 218 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 ACP2P11117 423 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 SYN1P17600 705 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 SLC9A3P48764 834 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 KLF9Q13886 244 aaPredicted RBP5.11□□□□□ -1.59
VPS50-202ENST00000305866 MRM1Q6IN84 353 aaKnown RBP5.11□□□□□ -1.59
VPS50-202ENST00000305866 MED27Q6P2C8 311 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 ZNF767PQ75MW2 155 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 UTS2BQ765I0 119 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 KCTD20Q7Z5Y7 419 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 TBC1D19Q8N5T2 526 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 ANKRD53Q8N9V6 530 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 UXS1Q8NBZ7 420 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 ZNF680Q8NEM1 530 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 ST13P5Q8NFI4 369 aaPredicted RBP5.11□□□□□ -1.59
VPS50-202ENST00000305866 OR52J3Q8NH60 311 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 GRPEL2Q8TAA5 225 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 LHFPL5Q8TAF8 219 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 IRF7Q92985 503 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 UBE2E3Q969T4 207 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 FRMD6Q96NE9 622 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 ABHD1Q96SE0 405 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 ARHGDIGQ99819 225 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 UCK2Q9BZX2 261 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 ZDHHC5Q9C0B5 715 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 IRF2BPLQ9H1B7 796 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 NMRK2Q9NPI5 230 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 SPHK2Q9NRA0 654 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 RHCGQ9UBD6 479 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.11□□□□□ -1.59
VPS50-202ENST00000305866 ORC6Q9Y5N6 252 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 A0A0A6YYD5 115 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 PNMA8CA0A1B0GUJ8 204 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 CIB4A0PJX0 185 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 C12orf71A8MTZ7 269 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 MYO1GB0I1T2 1018 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 TLR4O00206 839 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 GNGT2O14610 69 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 PRRG1O14668 218 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 SURF4O15260 269 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 SCO1O75880 301 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 NCR1O76036 304 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 TRIM16O95361 564 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 RAF1P04049 648 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 EIF4EP06730 217 aaKnown RBP5.11□□□□□ -1.59
VPS50-202ENST00000305866 DDCP20711 480 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 CCR2P41597 374 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 ARHGDIAP52565 204 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 CYP4F2P78329 520 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.11□□□□□ -1.59
VPS50-202ENST00000305866 BAMBIQ13145 260 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 HNRNPA0Q13151 305 aaKnown RBP5.11□□□□□ -1.59
VPS50-202ENST00000305866 CLLU1Q5K131 121 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 CPTPQ5TA50 214 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 LIPKQ5VXJ0 399 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 CNIH2Q6PI25 160 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 SMARCD3Q6STE5 483 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 COMMD6Q7Z4G1 85 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 BIVMQ86UB2 503 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 GRAMD2AQ8IUY3 354 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 SLC44A2Q8IWA5 706 aaPredicted RBP5.11□□□□□ -1.59
VPS50-202ENST00000305866 AMER3Q8N944 861 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 FAM98AQ8NCA5 519 aaKnown RBP5.11□□□□□ -1.59
VPS50-202ENST00000305866 ZNF480Q8WV37 535 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 OR5P2Q8WZ92 322 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 DIO2Q92813 273 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 DDOQ99489 341 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 TM9SF2Q99805 663 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 TSSK6Q9BXA6 273 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 SLC6A16Q9GZN6 736 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 MCUBQ9NWR8 336 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 DNAJC27Q9NZQ0 273 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 CFAP97Q9P2B7 532 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 SLC25A13Q9UJS0 675 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 ICAM5Q9UMF0 924 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 GPR55Q9Y2T6 319 aaPredicted RBP5.11□□□□□ -1.59
VPS50-202ENST00000305866 MEIKINA0A087WXM9 373 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 CENPXA8MT69 81 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 CDRT1O95170 752 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 HIST1H2AGP0C0S8 130 aaPredicted RBP5.11□□□□□ -1.59
VPS50-202ENST00000305866 HOXB3P14651 431 aaPredicted RBP5.11□□□□□ -1.59
VPS50-202ENST00000305866 RPL17P18621 184 aaKnown RBP5.11□□□□□ -1.59
VPS50-202ENST00000305866 HIST1H2ADP20671 130 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 MST1P26927 711 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 CLK1P49759 484 aaKnown RBP5.11□□□□□ -1.59
VPS50-202ENST00000305866 CTBP2P56545 445 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 TAP2Q03519 686 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 RGS1Q08116 209 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 PUDPQ08623 228 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 RIPPLY1Q0D2K3 151 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 COX10Q12887 443 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 SF3A2Q15428 464 aaKnown RBP5.11□□□□□ -1.59
VPS50-202ENST00000305866 GSG1Q2KHT4 349 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 PDZK1Q5T2W1 519 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 GCNT6Q5T4J0 391 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 TXNDC8Q6A555 127 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 C22orf42Q6IC83 251 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 SYCE2Q6PIF2 218 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms