RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 RNF121Q9H920 327 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 GPN2Q9H9Y4 310 aaPredicted RBP15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 OLAHQ9NV23 265 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 MYO18AQ92614 2054 aaKnown RBP15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 A0A0G2JPF8 293 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 HNRNPCL3B7ZW38 293 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 RP2O75695 350 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 HNRNPCL4P0DMR1 293 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 ADH7P40394 386 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 RABIFP47224 123 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 RGRP47804 291 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 EIF1AXP47813 144 aaKnown RBP15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 ELMOD2Q8IZ81 293 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 COQ8AQ8NI60 647 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 FGF13Q92913 245 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 BRF2Q9HAW0 419 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 FOLH1BQ9HBA9 442 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 EIF1AYO14602 144 aaKnown RBP15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 TP53I11O14683 189 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 RBMS1P29558 406 aaKnown RBP15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 SLC6A9P48067 706 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 PIN1Q13526 163 aaPredicted RBP15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 CTSL3PQ5NE16 218 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 GDPGP1Q6ZNW5 385 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 DEFB126Q9BYW3 111 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 SH2B3Q9UQQ2 575 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 HCFC2Q9Y5Z7 792 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 CACNA1SQ13698 1873 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 HMX2A2RU54 273 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 RNASET2O00584 256 aaKnown RBP15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 GP1BBP13224 206 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 HNRNPA2B1P22626 353 aaKnown RBP15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 CXCR4P61073 352 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 LRIT3Q3SXY7 679 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 UNC5DQ6UXZ4 953 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 SCGB3A2Q96PL1 93 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 HCFC1R1Q9NWW0 138 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 B3GNT3Q9Y2A9 372 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 PLEKHA6Q9Y2H5 1048 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 PADI2Q9Y2J8 665 aa15.24■□□□□ 0.03
ARHGEF28-201ENST00000296794 ZNF878C9JN71 531 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 M0R3H8 397 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 MUSKO15146 869 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 RBBP9O75884 186 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 SCGNO76038 276 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 CAPNS1P04632 268 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 CDK1P06493 297 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 AK4P27144 223 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 SNRPD2P62316 118 aaKnown RBP15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 TMEM35AQ53FP2 167 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 KCTD9Q7L273 389 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 VWA5B2Q8N398 1253 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 OR6Q1Q8NGQ2 317 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 THRSPQ92748 146 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 TSACCQ96A04 125 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 TRIM43Q96BQ3 446 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 EGLN2Q96KS0 407 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 FZD3Q9NPG1 666 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 IL20RAQ9UHF4 553 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 PRSS21Q9Y6M0 314 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 TRBV2A0A0J9YWF9 115 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 NUAK1O60285 661 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 ADAMTS4O75173 837 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 CHAF1BQ13112 559 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 GAS6Q14393 721 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 KIAA0319Q5VV43 1072 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 TCEAL6Q6IPX3 200 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 EIF5AL1Q6IS14 154 aaKnown RBP15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 DOK4Q8TEW6 326 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 CASTOR1Q8WTX7 329 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 ZNF486Q96H40 463 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 CACNG6Q9BXT2 260 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 ACTR6Q9GZN1 396 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 MCOLN1Q9GZU1 580 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 ACOT13Q9NPJ3 140 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 CD93Q9NPY3 652 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 RARRES3Q9UL19 164 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 KNL1Q8NG31 2342 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 DISC1C4P0D8 188 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 C21orf33P30042 268 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 WNT4P56705 351 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 PLBD1Q6P4A8 553 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 NRMQ8IXM6 262 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 ASB15Q8WXK1 588 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 DPCDQ9BVM2 203 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 NOX1Q9Y5S8 564 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 APOC1P02654 83 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 GTF2F2P13984 249 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 CXCL12P48061 93 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 FNTBP49356 437 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 RABEPKQ7Z6M1 372 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 GATSQ8NAP1 163 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 THAP4Q8WY91 577 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 NANSQ9NR45 359 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 ANKRD12Q6UB98 2062 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 NWD2Q9ULI1 1742 aa15.23■□□□□ 0.03
ARHGEF28-201ENST00000296794 WASHC1A8K0Z3 465 aa15.22■□□□□ 0.03
ARHGEF28-201ENST00000296794 WASH3PC4AMC7 463 aa15.22■□□□□ 0.03
ARHGEF28-201ENST00000296794 E2F3O00716 465 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms