RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 TRNT1Q96Q11 434 aaKnown RBP8.57□□□□□ -1.04
PDPN-201ENST00000294489 CSF3RQ99062 836 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 ELF4Q99607 663 aaPredicted RBP8.57□□□□□ -1.04
PDPN-201ENST00000294489 DUSP21Q9H596 190 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 PTGFRNQ9P2B2 879 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 CLCA2Q9UQC9 943 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 MN1Q10571 1320 aaPredicted RBP8.57□□□□□ -1.04
PDPN-201ENST00000294489 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 ZNF860A6NHJ4 632 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 FAAHO00519 579 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 PCDHGA12O60330 932 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 ADAP00813 363 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 HTR1AP08908 422 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 CPMP14384 443 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 GLB1P16278 677 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 CBLP22681 906 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 PCSK6P29122 969 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 GSSP48637 474 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 IDH2P48735 452 aaKnown RBP8.56□□□□□ -1.04
PDPN-201ENST00000294489 OLR1P78380 273 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 SLC35A2P78381 396 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 PIGFQ07326 219 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 FUT5Q11128 374 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 NPTX1Q15818 432 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 FHL5Q5TD97 284 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 CCDC71Q8IV32 467 aaPredicted RBP8.56□□□□□ -1.04
PDPN-201ENST00000294489 ENTHD1Q8IYW4 607 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 GIMAP5Q96F15 307 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 MAP3K3Q99759 626 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 PINK1Q9BXM7 581 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 LHPPQ9H008 270 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 CACYBPQ9HB71 228 aaKnown RBP8.56□□□□□ -1.04
PDPN-201ENST00000294489 PAK1IP1Q9NWT1 392 aaPredicted RBP8.56□□□□□ -1.04
PDPN-201ENST00000294489 IMPAD1Q9NX62 359 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 GIN1Q9NXP7 522 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 NLGN3Q9NZ94 848 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 PCDHGB1Q9Y5G3 927 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 IGHV1OR21-1A0A087WYE8 117 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 TRBV4-1A0A0J9YWV2 114 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 OR10H3O60404 316 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 SLITRK5O94991 958 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 LGI1O95970 557 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 GASTP01350 101 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 ITIH1P19827 911 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 TMBIM6P55061 237 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 RAB38P57729 211 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 FAM214AQ32MH5 1076 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 MFSD4BQ5TF39 518 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 GARNL3Q5VVW2 1013 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 AP1ARQ63HQ0 302 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 PRSS41Q7RTY9 318 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 OR4N5Q8IXE1 308 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 SLC35F3Q8IY50 421 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 SVOPQ8N4V2 548 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 OR7G2Q8NG99 324 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 DHRS1Q96LJ7 313 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 DOK1Q99704 481 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 FNDC11Q9BVV2 318 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 DGCR6LQ9BY27 220 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 ANKRA2Q9H9E1 313 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 AASSQ9UDR5 926 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 WARS2Q9UGM6 360 aaKnown RBP8.56□□□□□ -1.04
PDPN-201ENST00000294489 SUSD2Q9UGT4 822 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 FBXO4Q9UKT5 387 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 ACAD8Q9UKU7 415 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 MGAT4BQ9UQ53 548 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 RNF6Q9Y252 685 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 SCN3AQ9NY46 2000 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 SPAG17Q6Q759 2223 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 A0A1B0GTQ1 180 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 BLACEA4D250 179 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 M0R3H8 397 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 RGS10O43665 173 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 SDC3O75056 442 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 ATP1B1P05026 303 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 ALPPP05187 535 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 CTSBP07858 339 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 GNSP15586 552 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 ELAVL4P26378 380 aaKnown RBP8.56□□□□□ -1.04
PDPN-201ENST00000294489 CDC42P60953 191 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 SKP1P63208 163 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 CFHR1Q03591 330 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 BNIP3Q12983 259 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 FAM53BQ14153 422 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 ZNF311Q5JNZ3 666 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 MFSD12Q6NUT3 480 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 CDC73Q6P1J9 531 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 Q6ZPB1 254 aaPredicted RBP8.56□□□□□ -1.04
PDPN-201ENST00000294489 RBM45Q8IUH3 476 aaKnown RBP8.56□□□□□ -1.04
PDPN-201ENST00000294489 C1orf210Q8IVY1 113 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 OR2L13Q8N349 312 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 RORBQ92753 470 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 TANKQ92844 425 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 UBE2FQ969M7 185 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 ZDHHC12Q96GR4 267 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 LIN28AQ9H9Z2 209 aaKnown RBP8.56□□□□□ -1.04
PDPN-201ENST00000294489 ANKHQ9HCJ1 492 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 LRIT1Q9P2V4 623 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 ERVK-18Q9QC07 812 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 PLCL2Q9UPR0 1127 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms