RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 ARHGAP11BQ3KRB8 267 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 TRMT12Q53H54 448 aaKnown RBP9.52□□□□□ -0.89
C9orf43-201ENST00000288462 GARNL3Q5VVW2 1013 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 XAF1Q6GPH4 301 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 WDR53Q7Z5U6 358 aaPredicted RBP9.52□□□□□ -0.89
C9orf43-201ENST00000288462 ALDH16A1Q8IZ83 802 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 SGCDQ92629 289 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 HOXB13Q92826 284 aaPredicted RBP9.52□□□□□ -0.89
C9orf43-201ENST00000288462 CTHRC1Q96CG8 243 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 PRRC1Q96M27 445 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 TGM7Q96PF1 710 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 TUBA1CQ9BQE3 449 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 QRSL1Q9H0R6 528 aaKnown RBP9.52□□□□□ -0.89
C9orf43-201ENST00000288462 PIGUQ9H490 435 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 ZNF556Q9HAH1 456 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 PTTG2Q9NZH5 202 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 SATB2Q9UPW6 733 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 A0A0A6YYC8 382 aaPredicted RBP9.51□□□□□ -0.89
C9orf43-201ENST00000288462 A0A1B0GVT2 93 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 A0A1W2PRQ8 180 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 FITM1A5D6W6 292 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 RHPN2P1A8MT19 583 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 I3L1I5 382 aaPredicted RBP9.51□□□□□ -0.89
C9orf43-201ENST00000288462 ZNF701M0R085 212 aaPredicted RBP9.51□□□□□ -0.89
C9orf43-201ENST00000288462 HRO43593 1189 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 WBP4O75554 376 aaKnown RBP9.51□□□□□ -0.89
C9orf43-201ENST00000288462 UGT2B17O75795 530 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 SLC35E2P0CK97 266 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 GIMD1P0DJR0 217 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 NT5EP21589 574 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 EEF1B2P24534 225 aaKnown RBP9.51□□□□□ -0.89
C9orf43-201ENST00000288462 MAP3K8P41279 467 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 FNTBP49356 437 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 HPCAP84074 193 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 TEKQ02763 1124 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 PMS2P3Q13401 168 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 COL9A2Q14055 689 aaPredicted RBP9.51□□□□□ -0.89
C9orf43-201ENST00000288462 DGCR6Q14129 220 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 RAB39AQ14964 217 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 NR1D2Q14995 579 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 PROX2Q3B8N5 592 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 FGD3Q5JSP0 725 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 ZCCHC12Q6PEW1 402 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 HMGN2P46Q86SG4 172 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 ENTHD1Q8IYW4 607 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 SPARTQ8N0X7 666 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 CARFQ8N187 725 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 OR6C4Q8NGE1 309 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 OR6T1Q8NGN1 323 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 APH1BQ8WW43 257 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 ZDHHC12Q96GR4 267 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 STACQ99469 402 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 DUSP22Q9NRW4 184 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 MAN2C1Q9NTJ4 1040 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 FTSJ1Q9UET6 329 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 RSL24D1Q9UHA3 163 aaKnown RBP9.51□□□□□ -0.89
C9orf43-201ENST00000288462 TMCC3Q9ULS5 477 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 MGAT4BQ9UQ53 548 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 CHST2Q9Y4C5 530 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 DNAH14Q0VDD8 3507 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 NUP210LQ5VU65 1888 aa9.51□□□□□ -0.89
C9orf43-201ENST00000288462 IGHV1OR21-1A0A087WYE8 117 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 SH3PXD2BA1X283 911 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 HYKKA2RU49 373 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 CCDC160A6NGH7 325 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 NUDT21O43809 227 aaKnown RBP9.5□□□□□ -0.89
C9orf43-201ENST00000288462 PCDHGA12O60330 932 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 FCMRO60667 390 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 ZBTB11O95625 1053 aaPredicted RBP9.5□□□□□ -0.89
C9orf43-201ENST00000288462 CT62P0C5K7 136 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 FMO3P31513 532 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 KRT20P35900 424 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 EMP3P54852 163 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 SLC35A2P78381 396 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 ZNF311Q5JNZ3 666 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 TCTE1Q5JU00 501 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 DCST1Q5T197 706 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 MLIPQ5VWP3 458 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 CWF19L1Q69YN2 538 aaKnown RBP9.5□□□□□ -0.89
C9orf43-201ENST00000288462 TYW3Q6IPR3 259 aaKnown RBP9.5□□□□□ -0.89
C9orf43-201ENST00000288462 KLHL17Q6TDP4 642 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 Q6ZPB1 254 aaPredicted RBP9.5□□□□□ -0.89
C9orf43-201ENST00000288462 VRK2Q86Y07 508 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 SLC35F3Q8IY50 421 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 SLC25A45Q8N413 288 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 CDRT4Q8N9R6 151 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 BPIFB6Q8NFQ5 453 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 NR4A3Q92570 626 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 SLC9A6Q92581 669 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 NMD3Q96D46 503 aaKnown RBP9.5□□□□□ -0.89
C9orf43-201ENST00000288462 CNDP2Q96KP4 475 aaKnown RBP9.5□□□□□ -0.89
C9orf43-201ENST00000288462 DGCR6LQ9BY27 220 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 ZNF350Q9GZX5 532 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 DUSP21Q9H596 190 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 TRIM45Q9H8W5 580 aaPredicted RBP9.5□□□□□ -0.89
C9orf43-201ENST00000288462 VCX3AQ9NNX9 186 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 PDE7BQ9NP56 450 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 SOHLH2Q9NX45 425 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 HCN3Q9P1Z3 774 aa9.5□□□□□ -0.89
C9orf43-201ENST00000288462 LRIT1Q9P2V4 623 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms