RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 OR8D2Q9GZM6 311 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 IGHV3-20A0A0C4DH32 117 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 DUXAA6NLW8 204 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 CXCR6O00574 342 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 TERTO14746 1132 aaKnown RBP17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 ASNA1O43681 348 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 IGHEP01854 428 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 CLPSP04118 112 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 OR12D1P0DN82 309 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 POLE2P56282 527 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 SLC34A1Q06495 639 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 EXOSC6Q5RKV6 272 aaKnown RBP17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 DTX1Q86Y01 620 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 CDRT4Q8N9R6 151 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 SLC16A11Q8NCK7 471 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 C11orf65Q8NCR3 313 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 ADAMTS15Q8TE58 950 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 ZNF721Q8TF20 911 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 FIG4Q92562 907 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 RAB8BQ92930 207 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 NSMCE2Q96MF7 247 aa17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 HEMK1Q9Y5R4 338 aaPredicted RBP17.59■□□□□ 0.41
PDLIM3-202ENST00000284770 LOC102723996A0A087X1L8 192 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 GSTA4O15217 222 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 DLSTP36957 453 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 MAP3K8P41279 467 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 SLC37A1P57057 533 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 DNASE1L3Q13609 305 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 VEZF1Q14119 521 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 WDR53Q7Z5U6 358 aaPredicted RBP17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 OR1N1Q8NGS0 311 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 C16orf52Q8NHV5 167 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 CANT1Q8WVQ1 401 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 XAGE5Q8WWM1 108 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 HOXB13Q92826 284 aaPredicted RBP17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 NKD1Q969G9 470 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 OR7D2Q96RA2 312 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 LPAR4Q99677 370 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 WDR77Q9BQA1 342 aaPredicted RBP17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 A4GALTQ9NPC4 353 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 THSD1Q9NS62 852 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 CCDC88CQ9P219 2028 aa17.58■□□□□ 0.41
PDLIM3-202ENST00000284770 SAGE2PA6NJ88 616 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 CREG1O75629 220 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 TFPTP0C1Z6 253 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 ARAFP10398 606 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 MMP11P24347 488 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 SLC7A1P30825 629 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 GPR143P51810 404 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 EEF1A2Q05639 463 aaKnown RBP17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 ZNF630Q2M218 657 aaPredicted RBP17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 MTX3Q5HYI7 312 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 IRAK1BP1Q5VVH5 260 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 ADGRG5Q8IZF4 528 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 ZNF321PQ8N8H1 164 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 FBXO30Q8TB52 745 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 SLC9A6Q92581 669 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 C8orf44Q96CB5 159 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 OTUB1Q96FW1 271 aaPredicted RBP17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 FOLH1BQ9HBA9 442 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 CCM2LQ9NUG4 571 aaPredicted RBP17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 GIN1Q9NXP7 522 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 PRODH2Q9UF12 536 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 PPIEQ9UNP9 301 aaKnown RBP17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 AK5Q9Y6K8 562 aa17.58■□□□□ 0.4
PDLIM3-202ENST00000284770 LOC101059948A0A1B0GTJ6 334 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 DHRS12A0PJE2 317 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 GMNNO75496 209 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 SOX30O94993 753 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 AGR2O95994 175 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 ACP2P11117 423 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 PCGF2P35227 344 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 RPS18P62269 152 aaKnown RBP17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 CDK6Q00534 326 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 ZNF155Q12901 538 aaPredicted RBP17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 SCARB2Q14108 478 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 SSPNQ14714 243 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 PAPD4Q6PIY7 484 aaKnown RBP17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 NFAM1Q8NET5 270 aaPredicted RBP17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 B3GNT7Q8NFL0 401 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 SLC38A5Q8WUX1 472 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 SLC35A4Q96G79 324 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 VSTM2LQ96N03 204 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 STACQ99469 402 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 LMF2Q9BU23 707 aaKnown RBP17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 NUDT9Q9BW91 350 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 PIGUQ9H490 435 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 DUSP22Q9NRW4 184 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 P2RX2Q9UBL9 471 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 COPS7AQ9UBW8 275 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 ANGPTL2Q9UKU9 493 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 CFL2Q9Y281 166 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 AP4S1Q9Y587 144 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 HS3ST3B1Q9Y662 390 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 KCNE3Q9Y6H6 103 aa17.57■□□□□ 0.4
PDLIM3-202ENST00000284770 TMEM247A6NEH6 219 aa17.56■□□□□ 0.4
PDLIM3-202ENST00000284770 BAG2O95816 211 aa17.56■□□□□ 0.4
PDLIM3-202ENST00000284770 GPIP06744 558 aa17.56■□□□□ 0.4
PDLIM3-202ENST00000284770 ALOX5P09917 674 aa17.56■□□□□ 0.4
PDLIM3-202ENST00000284770 F8A1P23610 371 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms