RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 FUT5Q11128 374 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 FADDQ13158 208 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 IL10RAQ13651 578 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 CCNIQ14094 377 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 RTP5Q14D33 572 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 PCOLCEQ15113 449 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 VMACQ2NL98 169 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 RPS26P11Q5JNZ5 115 aaPredicted RBP9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 GLYATQ6IB77 296 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 CDC73Q6P1J9 531 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 BHLHB9Q6PI77 547 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 KIRREL2Q6UWL6 708 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 NPSR1Q6W5P4 371 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 PPP1R32Q7Z5V6 425 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 NET1Q7Z628 596 aaPredicted RBP9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 SPPL2CQ8IUH8 684 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 ANKFN1Q8N957 763 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 OR10Q1Q8NGQ4 319 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 OR14A16Q8NHC5 309 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 ADAMTS15Q8TE58 950 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 SLC38A5Q8WUX1 472 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 DAZLQ92904 295 aaKnown RBP9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 FAM122AQ96E09 287 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 NAF1Q96HR8 494 aaKnown RBP9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 REXO5Q96IC2 774 aaKnown RBP9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 FBXL20Q96IG2 436 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 ITPAQ9BY32 194 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 RAD21L1Q9H4I0 556 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 FBXO34Q9NWN3 711 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 SUCOQ9UBS9 1254 aaKnown RBP9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 ZNF223Q9UK11 482 aaPredicted RBP9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 WASF3Q9UPY6 502 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 CORO2BQ9UQ03 480 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 CEP295Q9C0D2 2601 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 CDC14CA4D256 554 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 SAGE2PA6NJ88 616 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 CXCR6O00574 342 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 PRAMEF2O60811 474 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 ENTPD5O75356 428 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 SLITRK5O94991 958 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 BCHEP06276 602 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 TFPTP0C1Z6 253 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 ARAFP10398 606 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 COX6A1P12074 109 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 BMP2P12643 396 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 GGT1P19440 569 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 MMP11P24347 488 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 GABRA3P34903 492 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 MAP3K8P41279 467 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 ST13P50502 369 aaKnown RBP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 ELF3P78545 371 aaPredicted RBP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 CDK6Q00534 326 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 SCARB2Q14108 478 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 FLOT2Q14254 428 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 EXOSC6Q5RKV6 272 aaKnown RBP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 CCNJQ5T5M9 372 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 ATP1A1-AS1Q5TC04 95 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 IGF2-ASQ6U949 168 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 RNF111Q6ZNA4 994 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 C16orf47Q6ZP98 133 aaPredicted RBP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 DHFR2Q86XF0 187 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 C9orf40Q8IXQ3 194 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 ZSCAN1Q8NBB4 408 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 APCDD1LQ8NCL9 501 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 MORN4Q8NDC4 146 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 BHLHE22Q8NFJ8 381 aaPredicted RBP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 OR11G2Q8NGC1 345 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 OR1N1Q8NGS0 311 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 FAM110BQ8TC76 370 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 MIPOL1Q8TD10 442 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 GPR151Q8TDV0 419 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 THAP3Q8WTV1 239 aaPredicted RBP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 ASB9Q96DX5 294 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 TMEM19Q96HH6 336 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 VSTM2LQ96N03 204 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 GAL3ST4Q96RP7 486 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 LMF1Q96S06 567 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 LPAR4Q99677 370 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 RUBCNLQ9H714 662 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 THSD1Q9NS62 852 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 C19orf25Q9UFG5 118 aaPredicted RBP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 PADI2Q9Y2J8 665 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 AP3M1Q9Y2T2 418 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 LOC102723996A0A087X1L8 192 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 IGHV1-45A0A0A0MS14 117 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 A8MVJ9 347 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 C21orf140B9A014 251 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 DYRK3O43781 588 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 SLC28A2O43868 658 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 COQ9O75208 318 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 CREG1O75629 220 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 BCAS2O75934 225 aaPredicted RBP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 DXOO77932 396 aaKnown RBP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 ZIC2O95409 532 aaPredicted RBP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 OPN1SWP03999 348 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 CHRM4P08173 479 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 ALOX5P09917 674 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 CT45A8P0DMV1 189 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 CT45A9P0DMV2 189 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms