RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 CPOQ8IVL8 374 aa15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 OR9A2Q8NGT5 310 aa15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 ANKHQ9HCJ1 492 aa15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 MYLKQ15746 1914 aa15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 KCNE1BA0A087WTH5 132 aa15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 PLPP1O14494 284 aa15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 NOS1APO75052 506 aaPredicted RBP15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 CDC123O75794 336 aaPredicted RBP15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 SOX30O94993 753 aa15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 ASGR2P07307 311 aa15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 HNRNPA1P09651 372 aaKnown RBP eCLIP15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 GRPRP30550 384 aa15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 INSL4Q14641 139 aa15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 KLHL36Q8N4N3 616 aa15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 ANKK1Q8NFD2 765 aa15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 BCL7BQ9BQE9 202 aa15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 WDR45Q9Y484 360 aa15.29■□□□□ 0.04
PDZRN3-201ENST00000263666 INMT-MINDY4F8WBC2 141 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 UGDHO60701 494 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 HCN1O60741 890 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 ELAVL4P26378 380 aaKnown RBP15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 PTPN6P29350 595 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 MPIP34949 423 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 SOX9P48436 509 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 BEST4Q8NFU0 473 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 SAMD8Q96LT4 415 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 SAP130Q9H0E3 1048 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 C11orf54Q9H0W9 315 aaPredicted RBP15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 ENAMQ9NRM1 1142 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 TRIOBPQ9H2D6 2365 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 FAM172BPA6NC97 362 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 ORC5O43913 435 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 NAA10P41227 235 aaPredicted RBP15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 ARL4DP49703 201 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 LARS2Q15031 903 aaKnown RBP15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 CDKL4Q5MAI5 379 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 C11orf88Q6PI97 169 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 ASB15Q8WXK1 588 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 KRCC1Q9NPI7 259 aaPredicted RBP15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 SLC35C2Q9NQQ7 365 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 C1GALT1Q9NS00 363 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 ZC3H12DA2A288 527 aaKnown RBP15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 ARHGEF15O94989 841 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 NUDT14O95848 222 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 CTSLP07711 333 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 ADRB3P13945 408 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 DDCP20711 480 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 GNA13Q14344 377 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 SLC36A4Q6YBV0 504 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 FAM83HQ6ZRV2 1179 aaPredicted RBP15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 LACC1Q8IV20 430 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 COX18Q8N8Q8 333 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 NUP43Q8NFH3 380 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 VN1R2Q8NFZ6 395 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 RFKQ969G6 155 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 RC3H2Q9HBD1 1191 aaKnown RBP15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 HEPACAM2A8MVW5 462 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 EIF3FO00303 357 aaPredicted RBP15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 AKAP8O43823 692 aaKnown RBP15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 SCN2BO60939 215 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 RPP14O95059 124 aaKnown RBP15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 DRD5P21918 477 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 SOX18P35713 384 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 ACTR1BP42025 376 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 RAB14P61106 215 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 ACTR1AP61163 376 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 LTB4RQ15722 352 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 PEX5LQ8IYB4 626 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 KLHDC8AQ8IYD2 350 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 ZNF566Q969W8 418 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 ZNF514Q96K75 400 aaPredicted RBP15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 TXNL4BQ9NX01 149 aaKnown RBP15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 PLEKHM1Q9Y4G2 1056 aa15.28■□□□□ 0.04
PDZRN3-201ENST00000263666 TLX1P31314 330 aaPredicted RBP15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 GZMMP51124 257 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 CHRNEQ04844 493 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 EIF4HQ15056 248 aaKnown RBP15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 TCTN3Q6NUS6 607 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 WFIKKN2Q8TEU8 576 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 DTD2Q96FN9 168 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 CPEB1Q9BZB8 566 aaKnown RBP15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 DPH1Q9BZG8 443 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 LOC105369274A0A096LPK9 316 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 ANTXRLA6NF34 631 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 LATS1O95835 1130 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 IFNA16P05015 189 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 MMP11P24347 488 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 PYCR1P32322 319 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 ETV5P41161 510 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 XCR1P46094 333 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 ETV1P50549 477 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 C18orf63Q68DL7 685 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 METTL2BQ6P1Q9 378 aaKnown RBP15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 ZNF761Q86XN6 746 aaPredicted RBP15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 OR4N4Q8N0Y3 316 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 AMER3Q8N944 861 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 OR56A3Q8NH54 315 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 SLC7A5P2Q9GIP4 190 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 ABCG5Q9H222 651 aa15.27■□□□□ 0.04
PDZRN3-201ENST00000263666 CLEC4MQ9H2X3 399 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms