RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 C21orf59P57076 290 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 CD300CQ08708 224 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 GAS6Q14393 721 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 GINS1Q14691 196 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 ZIC1Q15915 447 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 TIGD6Q17RP2 521 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 FBXO42Q6P3S6 717 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 SHQ1Q6PI26 577 aaKnown RBP8.55□□□□□ -1.04
CKAP2-201ENST00000258607 UNC5DQ6UXZ4 953 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 TSEN54Q7Z6J9 526 aaKnown RBP8.55□□□□□ -1.04
CKAP2-201ENST00000258607 P2RY8Q86VZ1 359 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 CALHM3Q86XJ0 350 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 LRRC56Q8IYG6 542 aaPredicted RBP8.55□□□□□ -1.04
CKAP2-201ENST00000258607 B3GNT7Q8NFL0 401 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 RBM18Q96H35 190 aaKnown RBP8.55□□□□□ -1.04
CKAP2-201ENST00000258607 C7orf34Q96L11 122 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 NECAB3Q96P71 396 aaPredicted RBP8.55□□□□□ -1.04
CKAP2-201ENST00000258607 SH3GL3Q99963 347 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 TEX101Q9BY14 249 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF717Q9BY31 904 aaPredicted RBP8.55□□□□□ -1.04
CKAP2-201ENST00000258607 BHLHE41Q9C0J9 482 aaPredicted RBP8.55□□□□□ -1.04
CKAP2-201ENST00000258607 DZANK1Q9NVP4 752 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 GALNT8Q9NY28 637 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 TPRKBQ9Y3C4 175 aa8.55□□□□□ -1.04
CKAP2-201ENST00000258607 TRAV27A0A087WT01 109 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 ABCB7O75027 752 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 SERPINB7O75635 380 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 OPRL1P41146 370 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 UGT2B15P54855 530 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 GP2P55259 537 aaKnown RBP8.54□□□□□ -1.04
CKAP2-201ENST00000258607 CLDN6P56747 220 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 BNC1Q01954 994 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 NFATC3Q12968 1075 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 MTAPQ13126 283 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF791Q3KP31 576 aaPredicted RBP8.54□□□□□ -1.04
CKAP2-201ENST00000258607 TCTN3Q6NUS6 607 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 ERICH5Q6P6B1 374 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 ZDHHC1Q8WTX9 485 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 TMEM255BQ8WV15 326 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 GEMIN6Q8WXD5 167 aaKnown RBP8.54□□□□□ -1.04
CKAP2-201ENST00000258607 ELSPBP1Q96BH3 223 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 OR7D2Q96RA2 312 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF607Q96SK3 696 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 GPA33Q99795 319 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 PLA2G12AQ9BZM1 189 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 CCDC86Q9H6F5 360 aaKnown RBP8.54□□□□□ -1.04
CKAP2-201ENST00000258607 MYNNQ9NPC7 610 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 PTTG2Q9NZH5 202 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 P2RX2Q9UBL9 471 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 PCDHGA6Q9Y5G7 932 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 PLXNB3Q9ULL4 1909 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF99A8MXY4 864 aaPredicted RBP8.54□□□□□ -1.04
CKAP2-201ENST00000258607 B3GALT2O43825 422 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 AIREO43918 545 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 SNX4O95219 450 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 NPPAP01160 153 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 CAPNS1P04632 268 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 HPGDP15428 266 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 GNSP15586 552 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 ITPKBP27987 946 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 AHRP35869 848 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 HCCSP53701 268 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 NFATC4Q14934 902 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 MAD2L1BPQ15013 274 aaPredicted RBP8.54□□□□□ -1.04
CKAP2-201ENST00000258607 TEAD4Q15561 434 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 DUSP5Q16690 384 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 ARMCX4Q5H9R4 360 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 DGAT2L6Q6ZPD8 337 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 OR2L5Q8NG80 312 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 GATAD2BQ8WXI9 593 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 LRR1Q96L50 414 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 MCHR1Q99705 422 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 PIP5K1AQ99755 562 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 ACER3Q9NUN7 267 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 TMEM9Q9P0T7 183 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF346Q9UL40 294 aaKnown RBP8.54□□□□□ -1.04
CKAP2-201ENST00000258607 PSME2Q9UL46 239 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 MAN2B2Q9Y2E5 1009 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 PCDHGA4Q9Y5G9 962 aa8.54□□□□□ -1.04
CKAP2-201ENST00000258607 HEATR5AQ86XA9 2040 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 C17orf113A0A1B0GUU1 675 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 TSPAN11A1L157 253 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 PLRG1O43660 514 aaKnown RBP8.53□□□□□ -1.04
CKAP2-201ENST00000258607 TNFRSF21O75509 655 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 TNFP01375 233 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 PSMA3P25788 255 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 TRIM23P36406 574 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 CDC42P60953 191 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 TOP3AQ13472 1001 aaPredicted RBP8.53□□□□□ -1.04
CKAP2-201ENST00000258607 ZC3H12BQ5HYM0 836 aaKnown RBP8.53□□□□□ -1.04
CKAP2-201ENST00000258607 MTFR2Q6P444 385 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 LAS2Q8IYD9 372 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 SVOPLQ8N434 492 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 OR4F15Q8NGB8 312 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 C1GALT1C1Q96EU7 318 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 CENPOQ9BU64 300 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 KLHL1Q9NR64 748 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 SIRT3Q9NTG7 399 aaPredicted RBP8.53□□□□□ -1.04
CKAP2-201ENST00000258607 ATP6V1HQ9UI12 483 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 DAPK2Q9UIK4 370 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms