RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 WBP4O75554 376 aaKnown RBP13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 XKP51811 444 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 GPR68Q15743 365 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 CLEC12AQ5QGZ9 265 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 TDHQ8IZJ6 230 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 OR2L5Q8NG80 312 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 COPS4Q9BT78 406 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 NEK6Q9HC98 313 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 PLSCR3Q9NRY6 295 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 OSGIN1Q9UJX0 560 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 PRAMEF27A3QJZ7 478 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 TAF4O00268 1085 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 HCRTR1O43613 425 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 CLEC3AO75596 197 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 CCNB2O95067 398 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 F3P13726 295 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 RFX4Q33E94 735 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 CAMKMTQ7Z624 323 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 COMTD1Q86VU5 262 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 SVOPQ8N4V2 548 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 PARP16Q8N5Y8 322 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 SMRP1Q8NCR6 262 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 TTYH2Q9BSA4 534 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 RSPO3Q9BXY4 272 aaPredicted RBP13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 PRDM7Q9NQW5 492 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 RNF6Q9Y252 685 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 PCDHGB1Q9Y5G3 927 aa13.77□□□□□ -0.2
TRAFD1-201ENST00000257604 FCMRO60667 390 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 CH25HO95992 272 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 STSP08842 583 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 DRD1P21728 446 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 RGS1Q08116 209 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 MAP4K2Q12851 820 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 ENPP2Q13822 863 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 AGERQ15109 404 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 NXNL2Q5VZ03 156 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 FIGLAQ6QHK4 219 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 VRK2Q86Y07 508 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 ENTHD1Q8IYW4 607 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 STX19Q8N4C7 294 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 GPR32P1Q8NGA4 272 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 SLC37A2Q8TED4 501 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 RSC1A1Q92681 617 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 ZNF486Q96H40 463 aaPredicted RBP13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 METTL2AQ96IZ6 378 aaKnown RBP13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 NEDD4LQ96PU5 975 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 PIP5K1AQ99755 562 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 GDF15Q99988 308 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 FOXQ1Q9C009 403 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 NEUROD4Q9HD90 331 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 DNAJC27Q9NZQ0 273 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 NUP210Q8TEM1 1887 aaPredicted RBP13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 OR2A25A4D2G3 310 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 AGAP5A6NIR3 686 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 MYF5P13349 255 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 UGT2B7P16662 529 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 CSNK2A2P19784 350 aaPredicted RBP13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 NT5EP21589 574 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 S100A1P23297 94 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 MAZP56270 477 aaKnown RBP13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 TIGD6Q17RP2 521 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 FAM111BQ6SJ93 734 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 VN1R4Q7Z5H5 301 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 ZNF605Q86T29 641 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 ASPGQ86U10 573 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 NUP43Q8NFH3 380 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 RERGQ96A58 199 aaPredicted RBP13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 SLC6A18Q96N87 628 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 ACER3Q9NUN7 267 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 SNX7Q9UNH6 387 aa13.77□□□□□ -0.21
TRAFD1-201ENST00000257604 TNRC18O15417 2968 aaPredicted RBP13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 SGK494L7N484 410 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 M0R082 166 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 ITGAMP11215 1152 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 CASP3P42574 277 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 CHRNEQ04844 493 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 MXD1Q05195 221 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 SEC23BQ15437 767 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 MLIPQ5VWP3 458 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 FBXO42Q6P3S6 717 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 PTCHD4Q6ZW05 846 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 IKBIPQ70UQ0 350 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 GDPD3Q7L5L3 318 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 SLC22A18ASQ8N1D0 253 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 DEPDC4Q8N2C3 294 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 SLC16A11Q8NCK7 471 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 NEURL3Q96EH8 262 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 ZNF607Q96SK3 696 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 FNDC11Q9BVV2 318 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 ACTR10Q9NZ32 417 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 CPNE7Q9UBL6 633 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 PCDHGA6Q9Y5G7 932 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 A0A0A6YYD5 115 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 MAN2B1O00754 1011 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 FFAR1O14842 300 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 DNAJB5O75953 348 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 SEMA3DO95025 777 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 ITGA2P17301 1181 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 JUNDP17535 347 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 STXBP1P61764 594 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms