RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 SPHARQ15513 63 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 MORN1Q5T089 497 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 SLC7A7Q9UM01 511 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 PRSS21Q9Y6M0 314 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 G3V2L1 256 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 CD3GP09693 182 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 CAPN3P20807 821 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 RIDAP52758 137 aaKnown RBP17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 MRPL49Q13405 166 aaKnown RBP17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 ERV3-1Q14264 604 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 TIGD4Q8IY51 512 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 PHOX2BQ99453 314 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 HINT2Q9BX68 163 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 SLC2A11Q9BYW1 496 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 PPP6CO00743 305 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 HSD3B1P14060 373 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 HSD3B2P26439 372 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 PSMB5P28074 263 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 SFRP4Q6FHJ7 346 aaPredicted RBP17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 SYT14Q8NB59 555 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 M0QZQ0 153 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 FMO6PO60774 539 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 HOXD8P13378 290 aaPredicted RBP17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 DRD2P14416 443 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 AKR1C4P17516 323 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 ARL3P36405 182 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 FRKP42685 505 aaPredicted RBP17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 HES5Q5TA89 166 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 TSPEARQ8WU66 669 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 NEIL2Q969S2 332 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 ISPDA4D126 451 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 GBX1Q14549 363 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 LRIF1Q5T3J3 769 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 PM20D1Q6GTS8 502 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 OR5M10Q6IEU7 315 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 ALDH16A1Q8IZ83 802 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 TRIB3Q96RU7 358 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 CNN2Q99439 309 aaKnown RBP17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 ARFGEF2Q9Y6D5 1785 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 GSTT2P0CG29 244 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 HNRNPA2B1P22626 353 aaKnown RBP17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 HRH2P25021 359 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 NR4A2P43354 598 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 MTFR2Q6P444 385 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 RANBP10Q6VN20 620 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 GALNT6Q8NCL4 622 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 C15orf40Q8WUR7 153 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 PEX13Q92968 403 aa17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 RBM24Q9BX46 236 aaKnown RBP17.74■□□□□ 0.43
SMARCC1-201ENST00000254480 CLCA1A8K7I4 914 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 DPP6P42658 865 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 LSSP48449 732 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 NCS1P62166 190 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 DSC1Q08554 894 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 AAK1Q2M2I8 961 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 PIGGQ5H8A4 983 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 CFAP77Q6ZQR2 320 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 ZNF765Q7L2R6 523 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 TOR1AIP2Q8NFQ8 470 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 ZFYVE21Q9BQ24 234 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 APOOQ9BUR5 198 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 RNF38Q9H0F5 515 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 PCDHGB6Q9Y5F9 930 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 MYH10P35580 1976 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 GABBR2O75899 941 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 RBMS1P29558 406 aaKnown RBP17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 FOXK1P85037 733 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 GRM7Q14831 915 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 METTL2BQ6P1Q9 378 aaKnown RBP17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 OR4K5Q8NGD3 323 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 PCDH17O14917 1159 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 GGT1P19440 569 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 CLCN2P51788 898 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 ZNF423Q2M1K9 1284 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 TMEM35AQ53FP2 167 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 MINDY1Q8N5J2 469 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 MTMR10Q9NXD2 777 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 A0A0A6YYH2 397 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 CDC14CA4D256 554 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 A6NJ64 397 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 KIAA0355O15063 1070 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 ADAM12O43184 909 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 PPM1BO75688 479 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 SLC2A5P22732 501 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 CDKN2CP42773 168 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 RABIFP47224 123 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 C10orf62Q5T681 223 aaPredicted RBP17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 FAM205BPQ63HN1 556 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 MINDY2Q8NBR6 621 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 RHBDD1Q8TEB9 315 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 RHBDF1Q96CC6 855 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 CASD1Q96PB1 797 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 TMEM121BQ9BXQ6 578 aaPredicted RBP17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 GGT3PA6NGU5 568 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 MAGEA3P43357 314 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 AIMP2Q13155 320 aaKnown RBP17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 NIPAL1Q6NVV3 410 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 LGALS12Q96DT0 336 aa17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 COL2A1P02458 1487 aaPredicted RBP17.73■□□□□ 0.43
SMARCC1-201ENST00000254480 IVDP26440 423 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms