RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ZNF597Q96LX8 424 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 EFCAB11Q9BUY7 163 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 SORBS1Q9BX66 1292 aaKnown RBP12.61□□□□□ -0.39
DDX39A-201ENST00000242776 ACTR8Q9H981 624 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 ZBTB26Q9HCK0 441 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 PRDM7Q9NQW5 492 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 THAP1Q9NVV9 213 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 GALNT8Q9NY28 637 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 C6orf203Q9P0P8 240 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-201ENST00000242776 TRPS1Q9UHF7 1281 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 ADAM21Q9UKJ8 722 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 CNOT11Q9UKZ1 510 aaKnown RBP12.61□□□□□ -0.39
DDX39A-201ENST00000242776 ZNF490Q9ULM2 529 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-201ENST00000242776 CHCHD2Q9Y6H1 151 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-201ENST00000242776 OR7A17O14581 309 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 CASKO14936 926 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 PRAMEF4O60810 478 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 CRCPO75575 148 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 CLDN9O95484 217 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 TMIGD3P0DMS9 266 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-201ENST00000242776 MASP1P48740 699 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 ERVK-8P63133 956 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 PCDH1Q08174 1060 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 BST1Q10588 318 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 TRAF3Q13114 568 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 CHIT1Q13231 466 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 TBCCQ15814 346 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 HIST2H2ACQ16777 129 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-201ENST00000242776 WIPI1Q5MNZ9 446 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-201ENST00000242776 PRAMEF9Q5VWM5 478 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 NSUN5P2Q63ZY6 315 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 HIST2H2AA3Q6FI13 130 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 GPRIN3Q6ZVF9 776 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 UBE3DQ7Z6J8 389 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 MILR1Q7Z6M3 343 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 YTHDF3Q7Z739 585 aaKnown RBP12.6□□□□□ -0.39
DDX39A-201ENST00000242776 MYLK4Q86YV6 388 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-201ENST00000242776 MED12LQ86YW9 2145 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 NUBPLQ8TB37 319 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 UBE2E3Q969T4 207 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 GNRHR2Q96P88 292 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 PITHD1Q9GZP4 211 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-201ENST00000242776 UBTD1Q9HAC8 227 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 MID1IP1Q9NPA3 183 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 CNIH4Q9P003 139 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 ERVK-19Q9WJR5 959 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 EIF3LQ9Y262 564 aaKnown RBP12.6□□□□□ -0.39
DDX39A-201ENST00000242776 PCDHGB3Q9Y5G1 929 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 DSCAMO60469 2012 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 HIVEP2P31629 2446 aa12.6□□□□□ -0.39
DDX39A-201ENST00000242776 GNB5O14775 395 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 ERN1O75460 977 aaKnown RBP12.59□□□□□ -0.39
DDX39A-201ENST00000242776 ESRRBO95718 433 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 ENO1P06733 434 aaKnown RBP12.59□□□□□ -0.39
DDX39A-201ENST00000242776 BMP7P18075 431 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 TSPAN8P19075 237 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 EPORP19235 508 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 SERPINB3P29508 390 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 OPRM1P35372 400 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 SOX18P35713 384 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 CASP2P42575 452 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 STT3AP46977 705 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 FBXW4P57775 412 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 SORDQ00796 357 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 GUCY1A3Q02108 690 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 SRYQ05066 204 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 TGM3Q08188 693 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 ZNF267Q14586 743 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-201ENST00000242776 ADPRMQ3LIE5 342 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 GGTA1PQ4G0N0 100 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 ARL13AQ5H913 290 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-201ENST00000242776 GRHL2Q6ISB3 625 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 SLC29A4Q7RTT9 530 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 PM20D2Q8IYS1 436 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 ACOT4Q8N9L9 421 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 OR4F6Q8NGB9 312 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 OR52B6Q8NGF0 335 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 REPS1Q96D71 796 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 WDR34Q96EX3 536 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 UGT2B28Q9BY64 529 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 CCDC134Q9H6E4 229 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 LYRM4Q9HD34 91 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 QPCTLQ9NXS2 382 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 RAP2CQ9Y3L5 183 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 SPACA6W5XKT8 324 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 EXPH5Q8NEV8 1989 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 FBN1P35555 2871 aaKnown RBP12.59□□□□□ -0.39
DDX39A-201ENST00000242776 COL6A5A8TX70 2615 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 SYNDIG1LA6NDD5 238 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 POLR3GO15318 223 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-201ENST00000242776 DYRK3O43781 588 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 SNNO75324 88 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-201ENST00000242776 TGFB1P01137 390 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 CHRNGP07510 517 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 FBXO45P0C2W1 286 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 PCNAP12004 261 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 ATP5A1P25705 553 aaKnown RBP12.59□□□□□ -0.39
DDX39A-201ENST00000242776 HMOX2P30519 316 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 CPOXP36551 454 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 SSR2P43308 183 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms