RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 ZNF84P51523 738 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 PSPHP78330 225 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 NKX3-2P78367 333 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 GALNT2Q10471 571 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 SLC9B2Q86UD5 537 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 TMEM173Q86WV6 379 aaPredicted RBP13.21□□□□□ -0.3
TARDBP-201ENST00000240185 OR52P1PQ8NH57 321 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 SORCS1Q8WY21 1168 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 UHRF1Q96T88 793 aaPredicted RBP13.21□□□□□ -0.3
TARDBP-201ENST00000240185 MRIQ9BWK5 157 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 NT5DC2Q9H857 520 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 SLC28A3Q9HAS3 691 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 C9J4A7 227 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 TOR1AO14656 332 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 DNAJB6O75190 326 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 ARHGEF15O94989 841 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 BCL7AQ4VC05 210 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.21□□□□□ -0.3
TARDBP-201ENST00000240185 TPRG1Q6ZUI0 275 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 TTLL10Q6ZVT0 673 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 DCUN1D3Q8IWE4 304 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 OR5AK2Q8NH90 309 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 FNDC9Q8TBE3 224 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 ZNF516Q92618 1163 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 SGCZQ96LD1 299 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 FAM86C1Q9NVL1 165 aa13.21□□□□□ -0.3
TARDBP-201ENST00000240185 LOC285095A0A1B0GVY8 99 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 ACOT7O00154 380 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 TIA1P31483 386 aaKnown RBP eCLIP13.2□□□□□ -0.32e-7■■■□□ 19.2
TARDBP-201ENST00000240185 GGT2P36268 569 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 ETV5P41161 510 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 PREPP48147 710 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 ARL6IP1Q15041 203 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 ARHGAP40Q5TG30 622 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 NUP43Q8NFH3 380 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 CRTAC1Q9NQ79 661 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 IL37Q9NZH6 218 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 BACE2Q9Y5Z0 518 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 C1orf167Q5SNV9 1468 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 TTLL8A6PVC2 850 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 ZNF736B4DX44 427 aaPredicted RBP13.2□□□□□ -0.3
TARDBP-201ENST00000240185 PIP5K1CO60331 668 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 SCGB2A1O75556 95 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 ARAFP10398 606 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 PFKLP17858 780 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 AGXTP21549 392 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 GIFP27352 417 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 SELENOVP59797 346 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 UGT3A2Q3SY77 523 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 UNC50Q53HI1 259 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 OR4K5Q8NGD3 323 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 OR4Q3Q8NH05 313 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 GLYATL1Q969I3 302 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 SDSLQ96GA7 329 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 ZDHHC12Q96GR4 267 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 PINK1Q9BXM7 581 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 RANGRFQ9HD47 186 aaPredicted RBP13.2□□□□□ -0.3
TARDBP-201ENST00000240185 GKN1Q9NS71 199 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 RLIMQ9NVW2 624 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 PTPN2P17706 415 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 SOX3P41225 446 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 ALKAL2Q6UX46 152 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 ZDHHC14Q8IZN3 488 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 AK6Q9Y3D8 172 aaKnown RBP13.2□□□□□ -0.3
TARDBP-201ENST00000240185 HS3ST4Q9Y661 456 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 CEPT1Q9Y6K0 416 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 H7BY64 318 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 AKAIN1P0CW23 69 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 RPS27AP62979 156 aaKnown RBP13.2□□□□□ -0.3
TARDBP-201ENST00000240185 UBA52P62987 128 aaKnown RBP13.2□□□□□ -0.3
TARDBP-201ENST00000240185 NRROSQ86YC3 692 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 OR4K13Q8NH42 304 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 OR1S1Q8NH92 325 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 PRAP1Q96NZ9 151 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 SLC29A1Q99808 456 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 CNTNAP3Q9BZ76 1288 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 MYEF2Q9P2K5 600 aaKnown RBP13.2□□□□□ -0.3
TARDBP-201ENST00000240185 DKKL1Q9UK85 242 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 TP53TG5Q9Y2B4 290 aa13.2□□□□□ -0.3
TARDBP-201ENST00000240185 A6NLC8 198 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 ICMTO60725 284 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 CD1DP15813 335 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 HOXC8P31273 242 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 ETV1P50549 477 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 VSX2P58304 361 aaPredicted RBP13.19□□□□□ -0.3
TARDBP-201ENST00000240185 RPS26P62854 115 aaKnown RBP13.19□□□□□ -0.3
TARDBP-201ENST00000240185 ECH1Q13011 328 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 EIF4HQ15056 248 aaKnown RBP13.19□□□□□ -0.3
TARDBP-201ENST00000240185 KCNIP4Q6PIL6 250 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 ZNF546Q86UE3 836 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 IQCF1Q8N6M8 205 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 WFIKKN2Q8TEU8 576 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 OCSTAMPQ9BR26 566 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 NTPCRQ9BSD7 190 aaKnown RBP13.19□□□□□ -0.3
TARDBP-201ENST00000240185 G6PC3Q9BUM1 346 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 RETREG1Q9H6L5 497 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 ATXN7L1Q9ULK2 861 aaPredicted RBP13.19□□□□□ -0.3
TARDBP-201ENST00000240185 PHYHO14832 338 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 MRPS14O60783 128 aaKnown RBP13.19□□□□□ -0.3
TARDBP-201ENST00000240185 FBXO45P0C2W1 286 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms