RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 GPC6Q9Y625 555 aaPredicted RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 SH3D21A4FU49 640 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 PIP5K1CO60331 668 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 EIF2S1P05198 315 aaKnown RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 SCG5P05408 212 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 CEACAM5P06731 702 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 ASGR2P07307 311 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 HIST1H1TP22492 207 aaPredicted RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 PEBP1P30086 187 aaKnown RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 SDC2P34741 201 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 RAB28P51157 221 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 LIMK1P53667 647 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 RPS25P62851 125 aaKnown RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 SIM1P81133 766 aaPredicted RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 HNRNPA0Q13151 305 aaKnown RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 SRSF5Q13243 272 aaKnown RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 GPM6BQ13491 265 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 RUNX3Q13761 415 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 KRT73Q86Y46 540 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 PHC2Q8IXK0 858 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 SLC16A11Q8NCK7 471 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 BBS1Q8NFJ9 593 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 OR8J1Q8NGP2 316 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 CAPSLQ8WWF8 208 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 TSACCQ96A04 125 aaPredicted RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 ZNF582Q96NG8 517 aaPredicted RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 TBX5Q99593 518 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 TAPBPLQ9BX59 468 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 BEX2Q9BXY8 128 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 SAP130Q9H0E3 1048 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 PELI2Q9HAT8 420 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 SMURF1Q9HCE7 757 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 POLMQ9NP87 494 aaPredicted RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 LSM2Q9Y333 95 aaKnown RBP8.6□□□□□ -1.03
SYDE2-201ENST00000234668 BOLA1Q9Y3E2 137 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 TSC22D4Q9Y3Q8 395 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 PEX16Q9Y5Y5 336 aa8.6□□□□□ -1.03
SYDE2-201ENST00000234668 FAM170BA6NMN3 283 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 TAF4O00268 1085 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 SEMA3DO95025 777 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 ZIC2O95409 532 aaPredicted RBP8.59□□□□□ -1.03
SYDE2-201ENST00000234668 LALBAP00709 142 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 GNSP15586 552 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 ATP5A1P25705 553 aaKnown RBP8.59□□□□□ -1.03
SYDE2-201ENST00000234668 NTSP30990 170 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 GDI1P31150 447 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 CRTC2Q53ET0 693 aaPredicted RBP8.59□□□□□ -1.03
SYDE2-201ENST00000234668 SLC35F1Q5T1Q4 408 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 MFSD4BQ5TF39 518 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 C12orf73Q69YU5 71 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 ABHD17CQ6PCB6 329 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 ZNF730Q6ZMV8 503 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 RRM2BQ7LG56 351 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 AKAP14Q86UN6 197 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 NANOGP1Q8N7R0 232 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 NUP43Q8NFH3 380 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 ASB15Q8WXK1 588 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 QRFPRQ96P65 431 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 PSD2Q9BQI7 771 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 HDHD5Q9BXW7 423 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 TBC1D17Q9HA65 648 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 FGF22Q9HCT0 170 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 CNOT2Q9NZN8 540 aaKnown RBP8.59□□□□□ -1.03
SYDE2-201ENST00000234668 THAP10Q9P2Z0 257 aaPredicted RBP8.59□□□□□ -1.03
SYDE2-201ENST00000234668 SLC9A8Q9Y2E8 581 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 RPL36Q9Y3U8 105 aaKnown RBP8.59□□□□□ -1.03
SYDE2-201ENST00000234668 CHST2Q9Y4C5 530 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 ASB4Q9Y574 426 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 CSNK1G3Q9Y6M4 447 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 ARID1BQ8NFD5 2236 aaPredicted RBP8.59□□□□□ -1.03
SYDE2-201ENST00000234668 ARHGEF17Q96PE2 2063 aaPredicted RBP8.59□□□□□ -1.03
SYDE2-201ENST00000234668 H3BQ06 376 aaPredicted RBP8.59□□□□□ -1.03
SYDE2-201ENST00000234668 PDE9AO76083 593 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 RPN2P04844 631 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 GKN3PP0CG01 181 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 PBX2P40425 430 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 PDX1P52945 283 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 STXBP1P61764 594 aaKnown RBP8.59□□□□□ -1.03
SYDE2-201ENST00000234668 ZNF45Q02386 682 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 CSTF1Q05048 431 aaKnown RBP8.59□□□□□ -1.03
SYDE2-201ENST00000234668 ELOAQ14241 798 aaKnown RBP8.59□□□□□ -1.03
SYDE2-201ENST00000234668 ZNF181Q2M3W8 571 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 LRIT3Q3SXY7 679 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 DEFB134Q4QY38 66 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 TJAP1Q5JTD0 557 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 ZC3H14Q6PJT7 736 aaKnown RBP8.59□□□□□ -1.03
SYDE2-201ENST00000234668 SMARCD3Q6STE5 483 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 CCDC190Q86UF4 302 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 GLCCI1Q86VQ1 547 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 MORN4Q8NDC4 146 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 OR10G6Q8NH81 332 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 C9orf43Q8TAL5 461 aaPredicted RBP8.59□□□□□ -1.03
SYDE2-201ENST00000234668 TP53INP1Q96A56 240 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 RNFT2Q96EX2 444 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 FAM210AQ96ND0 272 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 OR7D2Q96RA2 312 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 TMED9Q9BVK6 235 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 NXF2Q9GZY0 626 aaKnown RBP8.59□□□□□ -1.03
SYDE2-201ENST00000234668 MED20Q9H944 212 aa8.59□□□□□ -1.03
SYDE2-201ENST00000234668 COMMD3Q9UBI1 195 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms