RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ANTXRLA6NF34 631 aa14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 BTN3A3O00478 584 aa14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 GNB5O14775 395 aa14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 AIFM1O95831 613 aa14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 AK4P27144 223 aaPredicted RBP14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 ZNF155Q12901 538 aaPredicted RBP14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 ILF3Q12906 894 aaKnown RBP eCLIP14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 PAQR6Q6TCH4 344 aa14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 SPATC1Q76KD6 591 aa14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 SAMD14Q8IZD0 417 aaPredicted RBP14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 AMER3Q8N944 861 aa14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 OR4K14Q8NGD5 310 aa14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 SLC22A18Q96BI1 424 aa14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 ASB16Q96NS5 453 aa14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 SECISBP2Q96T21 854 aaKnown RBP14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 CDADC1Q9BWV3 514 aa14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 HDHD5Q9BXW7 423 aa14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 SERHL2Q9H4I8 314 aa14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 LIPT1Q9Y234 373 aa14.1□□□□□ -0.15
UBE2D4-201ENST00000222402 AKAP8O43823 692 aaKnown RBP14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 DPM1O60762 260 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 HMGN1P05114 100 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 HPGDP15428 266 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 MMP11P24347 488 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 CCR4P51679 360 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 CLDN2P57739 230 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 PRRT3Q5FWE3 981 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 CCDC80Q76M96 950 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 PARGQ86W56 976 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 ADGRF3Q8IZF5 1079 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 ANKK1Q8NFD2 765 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 GRHL3Q8TE85 626 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 TSACCQ96A04 125 aaPredicted RBP14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 MOAP1Q96BY2 351 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 CLIP3Q96DZ5 547 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 CFHR5Q9BXR6 569 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 SAP130Q9H0E3 1048 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 WDR37Q9Y2I8 494 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 DNMT3AQ9Y6K1 912 aaPredicted RBP14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 GNSP15586 552 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 BCL6P41182 706 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 MVDP53602 400 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 ZNHIT3Q15649 155 aaPredicted RBP14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 MFSD4BQ5TF39 518 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 SLX4IPQ5VYV7 408 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 ASPGQ86U10 573 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 GALNT12Q8IXK2 581 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 PROKR2Q8NFJ6 384 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 OR4C15Q8NGM1 316 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 OSTF1Q92882 214 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 PHF21AQ96BD5 680 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 TMEM27Q9HBJ8 222 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 LRIT2A6NDA9 550 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 PRKYO43930 277 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 ADAM23O75077 832 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 GCGRP47871 477 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 PRKCDQ05655 676 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 ZNF791Q3KP31 576 aaPredicted RBP14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 CADM2Q8N3J6 435 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 SCAIQ8N9R8 606 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 UCN3Q969E3 161 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 WDR34Q96EX3 536 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 HDAC8Q9BY41 377 aa14.09□□□□□ -0.15
UBE2D4-201ENST00000222402 A0A1W2PQL4 384 aaPredicted RBP14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 CSO75390 466 aaKnown RBP14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 PAPLNO95428 1278 aa14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 HOXB9P17482 250 aaPredicted RBP14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 ATP5A1P25705 553 aaKnown RBP14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 NDUFS1P28331 727 aa14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 RPL4P36578 427 aaKnown RBP14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 WNT4P56705 351 aa14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 RHAGQ02094 409 aa14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 LCN1P1Q5VSP4 162 aa14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 GPR32P1Q8NGA4 272 aa14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 RSPRY1Q96DX4 576 aa14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 OR7D2Q96RA2 312 aa14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 TM9SF2Q99805 663 aa14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 SLC22A4Q9H015 551 aa14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 OR10H1Q9Y4A9 318 aa14.08□□□□□ -0.15
UBE2D4-201ENST00000222402 DAPL1A0PJW8 107 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 GPX5O75715 221 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 PRKAR1AP10644 381 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 IFI30P13284 250 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 LTB4RQ15722 352 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 LRRC25Q8N386 305 aaPredicted RBP14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 ANKMY1Q9P2S6 941 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 ADAM29Q9UKF5 820 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 EXOSC1Q9Y3B2 195 aaKnown RBP14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 CSNK1G3Q9Y6M4 447 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 FNDC1Q4ZHG4 1894 aaPredicted RBP14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 PLD2O14939 933 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 SOD1P00441 154 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 HLA-DPB1P04440 258 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 SCG5P05408 212 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 GJA8P48165 433 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 PCBP3P57721 371 aaKnown RBP14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 EIPR1Q53HC9 387 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 IDNKQ5T6J7 187 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 PIP5KL1Q5T9C9 394 aa14.08□□□□□ -0.16
UBE2D4-201ENST00000222402 ARL9Q6T311 187 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms