RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 NSDHLQ15738 373 aa12.89□□□□□ -0.35
SF3A1-201ENST00000215793 CMPK2Q5EBM0 449 aa12.89□□□□□ -0.35
SF3A1-201ENST00000215793 NRMQ8IXM6 262 aa12.89□□□□□ -0.35
SF3A1-201ENST00000215793 CDRT4Q8N9R6 151 aa12.89□□□□□ -0.35
SF3A1-201ENST00000215793 CD200R1Q8TD46 325 aa12.89□□□□□ -0.35
SF3A1-201ENST00000215793 APIPQ96GX9 242 aa12.89□□□□□ -0.35
SF3A1-201ENST00000215793 PITX2Q99697 317 aa12.89□□□□□ -0.35
SF3A1-201ENST00000215793 TXLNGYQ9BZA5 131 aa12.89□□□□□ -0.35
SF3A1-201ENST00000215793 FN3KQ9H479 309 aa12.89□□□□□ -0.35
SF3A1-201ENST00000215793 MGAT4CQ9UBM8 478 aa12.89□□□□□ -0.35
SF3A1-201ENST00000215793 PEAK1Q9H792 1746 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 ZNF217O75362 1048 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 SLC10A3P09131 477 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 NOVP48745 357 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 DLX2Q07687 328 aaPredicted RBP12.88□□□□□ -0.35
SF3A1-201ENST00000215793 RAB6CQ53S08 254 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 ASRGL1Q7L266 308 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 ZNF296Q8WUU4 475 aaPredicted RBP12.88□□□□□ -0.35
SF3A1-201ENST00000215793 ASB12Q8WXK4 309 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 LRRC46Q96FV0 321 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 RAB6CQ9H0N0 254 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 OR1A2Q9Y585 309 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 SMCO3A2RU48 225 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 A8MV72 311 aaPredicted RBP12.88□□□□□ -0.35
SF3A1-201ENST00000215793 DHRS4L1P0CG22 281 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 SLC22A10Q63ZE4 541 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 OR13C3Q8NGS6 347 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 TSACCQ96A04 125 aaPredicted RBP12.88□□□□□ -0.35
SF3A1-201ENST00000215793 SLC41A3Q96GZ6 507 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 METTL2AQ96IZ6 378 aaKnown RBP12.88□□□□□ -0.35
SF3A1-201ENST00000215793 HAPLN2Q9GZV7 340 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 HBQ1P09105 142 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 GALK2Q01415 458 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 NFATC3Q12968 1075 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 PLBD1Q6P4A8 553 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 ZNF100Q8IYN0 542 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 BEST3Q8N1M1 668 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 GPR137CQ8N3F9 429 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 ZNF611Q8N823 705 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 OR4K13Q8NH42 304 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 SLC25A44Q96H78 314 aaPredicted RBP12.88□□□□□ -0.35
SF3A1-201ENST00000215793 FAM46AQ96IP4 442 aaKnown RBP12.88□□□□□ -0.35
SF3A1-201ENST00000215793 MS4A4EQ96PG1 132 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 ANKRD60Q9BZ19 345 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 OR2B2Q9GZK3 357 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 ARL6Q9H0F7 186 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 SLC39A1Q9NY26 324 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 SPO11Q9Y5K1 396 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 MEN1O00255 615 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 NDUFB2O95178 105 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 UQCRC1P31930 480 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 VIPR2P41587 438 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 CDKN2CP42773 168 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 PRKXP51817 358 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 RPS15P62841 145 aaKnown RBP12.88□□□□□ -0.35
SF3A1-201ENST00000215793 SELENOWP63302 87 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 RAB11BQ15907 218 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 LDLRAD1Q5T700 205 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 HAGHLQ6PII5 290 aaPredicted RBP12.88□□□□□ -0.35
SF3A1-201ENST00000215793 TMEM173Q86WV6 379 aaPredicted RBP12.88□□□□□ -0.35
SF3A1-201ENST00000215793 CHST14Q8NCH0 376 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 ACVR1CQ8NER5 493 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 COQ8AQ8NI60 647 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 CRYGNQ8WXF5 182 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 PEX11GQ96HA9 241 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 C7orf34Q96L11 122 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 GSTO2Q9H4Y5 243 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 TMEM185BQ9H7F4 350 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 RDH14Q9HBH5 336 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 OR2S2Q9NQN1 319 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 POLE4Q9NR33 117 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 C2orf42Q9NWW7 574 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 PCDHGA7Q9Y5G6 932 aa12.88□□□□□ -0.35
SF3A1-201ENST00000215793 ZNF850A8MQ14 1090 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 SEMA4FO95754 770 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 NPR2P20594 1047 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 ADH6P28332 368 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 DCTP40126 519 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 MICAQ29983 383 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 CARD17Q5XLA6 110 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 LETMD1Q6P1Q0 360 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 C3P1Q6ZMU1 363 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 ANKRD13BQ86YJ7 626 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 CCDC28AQ8IWP9 274 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 SYNPOQ8N3V7 929 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 OR13J1Q8NGT2 312 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 CREB3L4Q8TEY5 395 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 PRR11Q96HE9 360 aaPredicted RBP12.87□□□□□ -0.35
SF3A1-201ENST00000215793 KCNS2Q9ULS6 477 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 FTCDNL1E5RQL4 147 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 ATE1O95260 518 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 ETV4P43268 484 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 PRPS1P60891 318 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 APOFQ13790 326 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 LRRTM3Q86VH5 581 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 GDPD1Q8N9F7 314 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 MAELQ96JY0 434 aaKnown RBP12.87□□□□□ -0.35
SF3A1-201ENST00000215793 SERINC2Q96SA4 455 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 ICKQ9UPZ9 632 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 AP1M2Q9Y6Q5 423 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms