RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 OR4N5Q8IXE1 308 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 OR9Q1Q8NGQ5 310 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 DDX31Q9H8H2 851 aaKnown RBP12.37□□□□□ -0.43
CTNS-201ENST00000046640 A4GALTQ9NPC4 353 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 TBC1D29Q9UFV1 150 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 CARD8Q9Y2G2 431 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 KLK4Q9Y5K2 254 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 A0A1W2PQ09 198 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 E9PQ18 207 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 BTN3A3O00478 584 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 PLD2O14939 933 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 H1F0P07305 194 aaKnown RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 HSD17B2P37059 387 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 HMGA2P52926 109 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 ERVK-21P61565 698 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 RPS21P63220 83 aaKnown RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 HYAL2Q12891 473 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 LTB4RQ15722 352 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 TMEM196Q5HYL7 178 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 ZNF770Q6IQ21 691 aaPredicted RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 KIAA1161Q6NSJ0 714 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 ENPP7Q6UWV6 458 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 SIMC1Q8NDZ2 872 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 OR2L3Q8NG85 312 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 NUP210Q8TEM1 1887 aaPredicted RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 APOBEC4Q8WW27 367 aaKnown RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 ASB15Q8WXK1 588 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 PIK3R3Q92569 461 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 MS4A6EQ96DS6 147 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 DHRS1Q96LJ7 313 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 NECTIN4Q96NY8 510 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 DEPDC7Q96QD5 511 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 APOOQ9BUR5 198 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 NKX2-4Q9H2Z4 354 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 PAQR5Q9NXK6 330 aaPredicted RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 NUFIP1Q9UHK0 495 aaKnown RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 MUC22E2RYF6 1773 aaPredicted RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 COL9A1P20849 921 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 KCNJ5P48544 419 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 BTN3A2P78410 334 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 CD83Q01151 205 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 RPE65Q16518 533 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 ZNF776Q68DI1 518 aaPredicted RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 ZNF544Q6NX49 715 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 TMEFF1Q8IYR6 380 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 UBQLNLQ8IYU4 475 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 ZFP41Q8N8Y5 198 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 OR6T1Q8NGN1 323 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 FYTTD1Q96QD9 318 aaKnown RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 ZNF607Q96SK3 696 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 UCK2Q9BZX2 261 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 POLR2J3Q9H1A7 115 aaKnown RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 FTSJ1Q9UET6 329 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 CENPXA8MT69 81 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 MAN2B1O00754 1011 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 TLX2O43763 284 aaPredicted RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 AIFM1O95831 613 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 ADH1BP00325 375 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 CHRM4P08173 479 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 HIST1H1TP22492 207 aaPredicted RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 RFX2P48378 723 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 MLLT1Q03111 559 aaPredicted RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 CAMK2BQ13554 666 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 SPHARQ15513 63 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 MLIPQ5VWP3 458 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 C22orf42Q6IC83 251 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 SHFQ7M4L6 423 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 ABI3BPQ7Z7G0 1075 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 GLCCI1Q86VQ1 547 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 RAB43Q86YS6 212 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 OR9A2Q8NGT5 310 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 ZCCHC10Q8TBK6 192 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 ZNF354BQ96LW1 612 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 PHOX2BQ99453 314 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 PRDM7Q9NQW5 492 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 CRNNQ9UBG3 495 aaPredicted RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 P2RX2Q9UBL9 471 aa12.36□□□□□ -0.43
CTNS-201ENST00000046640 APOBEC3BQ9UH17 382 aaKnown RBP12.36□□□□□ -0.43
CTNS-201ENST00000046640 MDC1Q14676 2089 aaKnown RBP12.35□□□□□ -0.43
CTNS-201ENST00000046640 ZAR1LA6NP61 321 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 DNAJB6O75190 326 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 CLEC3AO75596 197 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 UGT2B17O75795 530 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 ASGR2P07307 311 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 PSMA1P25786 263 aaKnown RBP12.35□□□□□ -0.43
CTNS-201ENST00000046640 PKLRP30613 574 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 NTSP30990 170 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 MC3RP41968 323 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 KIR2DL1P43626 348 aaPredicted RBP12.35□□□□□ -0.43
CTNS-201ENST00000046640 ADPRHP54922 357 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 RUNX1T1Q06455 604 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 DLX2Q07687 328 aaPredicted RBP12.35□□□□□ -0.43
CTNS-201ENST00000046640 TIMM50Q3ZCQ8 353 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 TJAP1Q5JTD0 557 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 PODNL1Q6PEZ8 512 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 CASP12Q6UXS9 341 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 GALNT12Q8IXK2 581 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 FAM46DQ8NEK8 389 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 LCN9Q8WX39 176 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 ARSGQ96EG1 525 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms