RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SHC2P98077 582 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 SLC14A2Q15849 920 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 FIGLAQ6QHK4 219 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 OR5P2Q8WZ92 322 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 C16orf58Q96GQ5 468 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 LYSMD1Q96S90 227 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 SNX11Q9Y5W9 270 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 CSNK1G3Q9Y6M4 447 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 A0A0A6YYC8 382 aaPredicted RBP11.39□□□□□ -0.59
CHPF2-201ENST00000035307 I3L1I5 382 aaPredicted RBP11.39□□□□□ -0.59
CHPF2-201ENST00000035307 PSMD9O00233 223 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 MBTPS2O43462 519 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 GABRA3P34903 492 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 PTGES3Q15185 160 aaKnown RBP11.39□□□□□ -0.59
CHPF2-201ENST00000035307 RTL10Q7L3V2 364 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 RAB43Q86YS6 212 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 NIPSNAP1Q9BPW8 284 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 WACQ9BTA9 647 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 RACGAP1Q9H0H5 632 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 RNF167Q9H6Y7 350 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 GORASP2Q9H8Y8 452 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 ANKHQ9HCJ1 492 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 SLC35C2Q9NQQ7 365 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 KCMF1Q9P0J7 381 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 CPNE7Q9UBL6 633 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 TNFRSF10DQ9UBN6 386 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 BTNL2Q9UIR0 455 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 ENPP4Q9Y6X5 453 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 ZFC3H1O60293 1989 aaKnown RBP11.39□□□□□ -0.59
CHPF2-201ENST00000035307 CCDC88CQ9P219 2028 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 SLC5A10A0PJK1 596 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 SH3PXD2BA1X283 911 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 CD8B2A6NJW9 211 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 FAM171A2A8MVW0 826 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 SGK494L7N484 410 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 STX11O75558 287 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 CD8BP10966 210 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 ACVR1BP36896 505 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 FNTBP49356 437 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 ARRB1P49407 418 aaPredicted RBP11.38□□□□□ -0.59
CHPF2-201ENST00000035307 SMSP52788 366 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 MAT1AQ00266 395 aaKnown RBP11.38□□□□□ -0.59
CHPF2-201ENST00000035307 MAD2L1BPQ15013 274 aaPredicted RBP11.38□□□□□ -0.59
CHPF2-201ENST00000035307 SUZ12Q15022 739 aaKnown RBP11.38□□□□□ -0.59
CHPF2-201ENST00000035307 RSC1A1Q92681 617 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 SECISBP2Q96T21 854 aaKnown RBP11.38□□□□□ -0.59
CHPF2-201ENST00000035307 ANKMY1Q9P2S6 941 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 CFL2Q9Y281 166 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 LTBRP36941 435 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 PHC1P78364 1004 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 SPHARQ15513 63 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 PRPF38BQ5VTL8 546 aaKnown RBP11.38□□□□□ -0.59
CHPF2-201ENST00000035307 CXXC5Q7LFL8 322 aaKnown RBP11.38□□□□□ -0.59
CHPF2-201ENST00000035307 TSPYL5Q86VY4 417 aaPredicted RBP11.38□□□□□ -0.59
CHPF2-201ENST00000035307 SLC37A2Q8TED4 501 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 FCGR1BQ92637 280 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 NKD1Q969G9 470 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 ZC4H2Q9NQZ6 224 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 SNX7Q9UNH6 387 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 LCMT2O60294 686 aaKnown RBP11.38□□□□□ -0.59
CHPF2-201ENST00000035307 SLCO2B1O94956 709 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 HPRP00739 348 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 FCARP24071 287 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 CD38P28907 300 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 GCGRP47871 477 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 CAV3P56539 151 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 OR2B6P58173 313 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 SKP1P63208 163 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 FADDQ13158 208 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 NFATC4Q14934 902 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 HYAL4Q2M3T9 481 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 CTU2Q2VPK5 515 aaKnown RBP11.38□□□□□ -0.59
CHPF2-201ENST00000035307 OR4C11Q6IEV9 310 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 SLCO4C1Q6ZQN7 724 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 SPRED1Q7Z699 444 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 SMRP1Q8NCR6 262 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 B3GNT7Q8NFL0 401 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 MAPKAP1Q9BPZ7 522 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 HDAC8Q9BY41 377 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 KLHL31Q9H511 634 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 POLEQ07864 2286 aa11.38□□□□□ -0.59
CHPF2-201ENST00000035307 SZT2Q5T011 3432 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 TRBV4-1A0A0J9YWV2 114 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 CLDN4O14493 209 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 ENTPD6O75354 484 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 EML2O95834 649 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 C1QCP02747 245 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 CEACAM5P06731 702 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 ZNF888P0CJ79 500 aaPredicted RBP11.37□□□□□ -0.59
CHPF2-201ENST00000035307 GNSP15586 552 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 TNFRSF4P43489 277 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 RORCP51449 518 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 MRPS21P82921 87 aaKnown RBP11.37□□□□□ -0.59
CHPF2-201ENST00000035307 SCN1BQ07699 218 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 MZT2BQ6NZ67 158 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 MZT2AQ6P582 158 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 NRMQ8IXM6 262 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 POP5Q969H6 163 aaKnown RBP11.37□□□□□ -0.59
CHPF2-201ENST00000035307 BHLHE41Q9C0J9 482 aaPredicted RBP11.37□□□□□ -0.59
CHPF2-201ENST00000035307 TMEM138Q9NPI0 162 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms