RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Rex2A2AWF2 685 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Skint2A7XUX6 400 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Nlgn4lB0F2B4 945 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Gm8229K7N749 213 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 PtgdsO09114 189 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Slc6a6O35316 621 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 NlkO54949 527 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Tnfaip1O70479 316 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 CaskO70589 926 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Mtx2O88441 263 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 DhfrP00375 187 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 P01631 113 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Csn1s1P19228 313 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Ubl4aP21126 157 aaKnown RBP10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Zic1P46684 447 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 BckdhaP50136 442 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Fezf1Q0VDQ9 475 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Ccser2Q3UHI0 833 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Usp30Q3UN04 517 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 AY358078Q6UY53 465 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Rhox11Q810N8 206 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Cox14Q8BH51 57 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Cmtr2Q8BWQ4 767 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 ExogQ8C163 368 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Pqlc3Q8C6U2 202 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Gulp1Q8K2A1 304 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Nmral1Q8K2T1 309 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 PpcsQ8VDG5 311 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Paip1Q8VE62 400 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Olfr649Q8VGW1 312 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Ppp2r2dQ925E7 453 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Eef1e1Q9D1M4 174 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Vmn1r52Q9EP79 309 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Pla2g12aQ9EPR2 192 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 PolmQ9JIW4 496 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Serinc3Q9QZI9 472 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Ddi2A2ADY9 399 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Zfp472B0V2W5 534 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Olfr640E9Q7P5 314 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Olfr1249L7MU51 318 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Sypl1O09117 261 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Dsc1P55849 886 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Pcbp3P57722 371 aaKnown RBP10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 PdxpP60487 292 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 JupQ02257 745 aaKnown RBP10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Gdf9Q07105 441 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Ccdc106Q3ULM0 279 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Ube2fbQ3UWQ3 185 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Dvl3Q61062 716 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Ostf1Q62422 215 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Ablim3Q69ZX8 682 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Gpc2Q8BKV1 579 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Slc15a3Q8BPX9 578 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 BC024139Q8BVJ3 772 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 ReltQ8BX43 436 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Hus1bQ8K572 276 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Ccdc71Q8VEG0 433 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Olfr535Q8VGL3 312 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Olfr380Q8VGT3 311 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 4930553M12RikQ9CUH1 165 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Cd302Q9DCG2 228 aa10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Rtp4Q9ER80 249 aaKnown RBP10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Nusap1Q9ERH4 427 aaKnown RBP10.96□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Adam34A2RSG8 714 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 FpgtG5E8F4 590 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 C1dO35473 141 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 NnmtO55239 264 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Nudt19P11930 357 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Zp2P20239 713 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Taf1aP97357 453 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Hoxd1Q01822 328 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Defb23Q30KP0 166 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 TepsinQ3U3N6 573 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Gm11992Q5SS90 291 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 ToxQ66JW3 526 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Olfr384Q7TRX8 312 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Smyd4Q8BTK5 799 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 FbrsQ8R089 466 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Rnf121Q8R1Z9 327 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Vmn1r75Q8R289 305 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Olfr771Q8VFH6 317 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Olfr444Q8VFS6 310 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Mrpl19Q9D338 292 aaKnown RBP10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Trappc4Q9ES56 219 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Sppl2aQ9JJF9 523 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Dennd4aE9Q8V6 1869 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 A0A286YDM2 672 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 TomtA1Y9I9 258 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Adamts3E9Q287 1204 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Gm21319F6YNI8 144 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 CyctP00015 105 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Cyp17a1P27786 507 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Limk1P53668 647 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Ephb3P54754 993 aaKnown RBP10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 IgfalsP70389 603 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Nr2f1Q60632 422 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Meig1Q61845 88 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Megf11Q80T91 1091 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Teddm1bQ8CC62 306 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Slc22a12Q8CFZ5 553 aa10.95□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms