RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Tspan1Q99J59 240 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Gpr146Q99LE2 333 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Slc24a3Q99PD7 645 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Cmss1Q9CZT6 276 aaKnown RBP9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 ItpaQ9D892 198 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Scamp4Q9JKV5 230 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Fbxo8Q9QZN3 319 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Gm29106A0A087WSP8 697 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Clip3B9EHT4 547 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Prr36E9PV26 1098 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ccr4P51680 360 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 QrfprP83861 433 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Cds1P98191 461 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Bcap29Q61334 240 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 CltbQ6IRU5 229 aaKnown RBP9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr684Q7TRN8 312 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Gpr176Q80WT4 515 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Serpina3fQ80X76 445 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 FkrpQ8CG64 494 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Cyp51a1Q8K0C4 503 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Cbx7Q8VDS3 158 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr686Q8VGX3 317 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Tssk6Q925K9 273 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Aph1cQ9DCZ9 258 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ropn1lQ9EQ00 218 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Slc7a9Q9QXA6 487 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Adam25Q9R159 760 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Cpne6Q9Z140 557 aa9.24□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 A0A1Y7VIU7 259 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Tgm7A2ART8 616 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 BC035947B2RQY6 695 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ptrhd1D3Z4S3 140 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Serpinb9eO08806 377 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 NsmafO35242 920 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 HpnO35453 436 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ubl4aP21126 157 aaKnown RBP9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Bmpr1aP36895 532 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 SgcgP82348 291 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Tmem64Q3U145 381 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 2900092C05RikQ5I0V9 184 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Vat1Q62465 406 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Fbxl19Q6PB97 674 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr1231Q7TQZ8 313 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Pum1Q80U78 1189 aaKnown RBP9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Adam29Q811Q4 763 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Fbxl4Q8BH70 621 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Fbxo9Q8BK06 437 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Q8CF31 99 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Galnt13Q8CF93 556 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 MrgprhQ99MT8 321 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ndufs4Q9CXZ1 175 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Eef1e1Q9D1M4 174 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Lmx1aQ9JKU8 382 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ascc3E9PZJ8 2198 aaKnown RBP9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Trbv20A0A0B4J1H5 111 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 A0A286YDM2 672 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Tyw5A2RSX7 315 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Zfp945E9PYM8 794 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Zfp809G3X9G7 402 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr1513L7N457 313 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ccrl2O35457 360 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Nudt19P11930 357 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Hmgn1P18608 96 aaKnown RBP9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Upp1P52624 311 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Wdr5P61965 334 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Dppa5bP85965 119 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 SmsP97355 366 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Gm10696Q3UTC4 357 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Gm11992Q5SS90 291 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Pon2Q62086 354 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Tvp23aQ6NVH0 222 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Znf182Q6P560 627 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 GnptgQ6S5C2 307 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Zadh2Q8BGC4 377 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Slc43a1Q8BSM7 564 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Q8C5S3 137 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Cacng6Q8VHW3 260 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Gadd45gip1Q9CR59 222 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Tnfrsf12aQ9CR75 129 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 MmabQ9D273 237 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Mcemp1Q9D8U6 183 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Insm2Q9JMC2 493 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Sema4gQ9WUH7 837 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 CcniQ9Z2V9 377 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Sbf1Q6ZPE2 1867 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Zfp981A2A8V7 445 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ankle1A8VU90 534 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Vmn2r95L7N274 845 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Prdx4O08807 274 aaKnown RBP9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ptpn22P29352 802 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Rab2bP59279 216 aaKnown RBP9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Fgf1P61148 155 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Eif4ebp2P70445 120 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 S100gP97816 79 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Nlrc3Q5DU56 1064 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Ostf1Q62422 215 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr1161Q7TR29 321 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Olfr1080Q7TR67 313 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Trim23Q8BGX0 574 aa9.23□□□□□ -0.93
Pcdh1-201ENSMUST00000057185 Clba1Q8BHN9 321 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms